Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01727 ATGGGAGTCTTCACCTTTGTCGTTCGCAAATCCGGCGCCGAATGGAGCGCCAAGCAACATTCCGGCGACATCGAGGCCTCCGCCGACTCCACCTACGATCTCCAAAGGAAGCTCGTGCAAGCCGCTCTCGCCGTTGATTCCTCCGGTGGAGTCCAGTCCTCCTTCTCTCCCGTGTCTCCTACCTCCGCTGTGTTCCAGGTGATAGTGGGtggtgctgtattcgttggaggtggcggtggtgctgttgcagctgcacctgcaggtggtgctgctgcagctgatgctgctgcagctgatgctgccccggctgctgagaaaaaggAAGAAAAGGTGGAGGAAGAGTCCGATGATGATATGGGATTGGGACTGTTTGATTAG 378 0.3942 MGVFTFVVRKSGAEWSAKQHSGDIEASADSTYDLQRKLVQAALAVDSSGGVQSSFSPVSPTSAVFQVIVGGAVFVGGGGGAVAAAPAGGAAAADAAAADAAPAAEKKEEKVEEESDDDMGLGLFD 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01727 125 MobiDBLite consensus disorder prediction 98 125 - -
Gma05g01727 125 Hamap 50S ribosomal protein L12 [rpl12]. 1 125 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gma05g01727 125 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 125 IPR044252 GO:0003735|GO:0005840
Gma05g01727 125 MobiDBLite consensus disorder prediction 111 125 - -
Gma05g01727 125 Pfam 60s Acidic ribosomal protein 79 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01727 Gma-Chr5 38907483 38909210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01727 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 77.941 1.47e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01727 K02942 - gmx:100527385 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01727 05 38907483 38909210 Gma08g01213 08 10303373 10304891 GST