Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01697 ATGGGGGATGTAGTGGAGTTAAGGTTGATGATGATGGTGCTGCCAAGCATGAGGTTAATGGAGGGTCCGCCAAAGGTGACAAAGAGGGAGAAGAAGCAGAAAAATAAGTGGCAATTCTGTCCCCAAATTGCCTTTGAAGATAAGGGAGAAACTGTTTTGTGGAATGTCTCTTTGGCTAATTGGGACTCTGATAAGttgaaattggctgcagAATCTCACGCCAAAGAGGATAATCCTTGTAGGCATAAACCAGAAATGGAAAACACACTTGAGTCTTCTGGCAGTCCACGGCATAGAAAGATATCAGCCAGATGGGATCCGGATGAAGCATGCCAGCCTATAGTTGATGAAGCACCTGTGTTTTATCCAACTATTGAGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATTCGCCCCCAAGCTGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGCTGGGTACCACCTTGCCCTCTTCAGGAGAAAGATTTATGGGAAAATGCAAAATTTCCCACTCGTATTCAGCAAATTGACTTGCTTCAGAACAGGGAACCCATGAGAAAGAAAATTAGGGGAAGGAAACGAAAACGTAGAAAGCAGTCAAAGATGGGCATGGGTATGAGAACTGCCAAATCAGGTTCTGAAGCTAATGTTGCTTCTGAGCCTGAGGAGAAGTTTGGATTCCAATCAGGGTCAGACTTCACACTTAAAGACTTTCAGCAATATGCTAATGTTTTTAAAGATTGCTACTTTGGATTGAATGATGCCAATGAATATGAAAAAGTTAGTGATAGTAGTCACCAGCAGAGATGGAAACCCTCTGTGGAGGAAATTGAAGGTGAATACTGGCGAATAATAGAGCAACCAACTGATGAGGTTGAGGTGTATTATGGAGCTGACTTGGAAACTGGATCACTTGGAAGTGGTTTTCCTAAGACATCTTCCTTAACTAAGAATGAGTCAGATAGATATGCCCTGTCTGGTTGGAATCTGAATAACTTCCCACGACTGCCAGGTTCTGCCTTATGTTTTGAAGGAAGTGATATCTCAGGAGTTGTAGTTCCATGGCTGTATGTTGGAATGTGCTTTTCCTCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTTAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGAGTAGCTGGAAGCCATGCTCCAGGTCTGGAAGATGCAATGAGAAAGCACTTGCCTGATTTATTTGAAGAACAACCAAATCTACTCAATGAATTGGTGACTCAGTTATCTCCTTCAATTCTTAAATCTGAGGGGGTGCCTGTACATCGCACTATTCAGCATTCAGGAGAATTTGTTGTTACCTTTCCAAGGGCATACCACTGTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCTGTGAATGTGGCTCCTGTTGATTGGCTTGTGCATGGCCAGAATGCTGCCGAGCTTTACAGTTTGCAGTGCCGTAAGACTTCATTGTCTCATGACAAGTTATTATTTGGATGTGCTCAGGAAGCCATGCATGCCCTTGCAGAGCTAACTCTTCATGGAAAAGAAAATCTAAAATATATAAAATGGAGAAGTGCTTGTGGGAAAGATGGAGTTCTTACCAAGGCAGTTAAGACAAGGATAACTATGGAAAAGGAAAGGCTTGACTGTCTTCCAACTCATTTAAAGATGCTGAGGATGGACAGTAAATTTGATTTGTTTGAGGAAAGAGAATGCTTCTCTTGCTTCTATGATTTGCACCTATCTGCCATAGGTTGCAAGTGCTCTCCTGACTGTTATTCTTGTCTCAAACACTCAAATTTGTTTTGCTCATGTGAAATGGACAACAGGTTTATTCTGTTTCGTTATACTATGAATGAACTAAGTACATTGGTTGAAGCATTAGAAGGAGAATCACATGCCATTGAAGTGTGGGCAAATAGAAACTCTGGAATGGTTTCTGCTAATGCTGAGGATGCTTGCATTTATAAACAAGATGTGGAGAGTGCCATTTGTCAAACCCAGAGTTACAAAGAAGGGAAAAACTCAACTTGTGCAGGAACTAATGATAAGTCAAATTCAACTATACTTAGTAGTTCTTACAGCCACATTTCAGCAGAATTAGTCCACTCAGAGTTTCACCATGAAACTTTTAGTGCACCATATGGCACTAAAGACTGTCATAAAGACAATTTGAATGAAAAAGATTTGGTAATGGACAATAAAGTTATGGTGGAGAAAGGAGGTTCTGTGGATTTGAATATTGATGTTATGTCTGGTGAACCTGAAAATTATTTTCTGCATGCTGCTGATTACCATCATAATAAGGGTGTTCCATATGTGGAAAAAGTCAGCTTTGCAGAGGCCAGAAAAGAACAAGACAACATGGAACCTGGGGCTGATTGTATTGCTGCCAAAGAATTTTCATCTTGTTCAAGGGATGTTCAAAATTCTTGTACACTTGATGGTTATAAATTGTTTGGAGTGGATCTGCAGATGCATTCTGATTCAGGAGAGCAACTCAACAGTGTATCTAAAATAGGTGACGCCGAAACCTCCAATACAAGTATATCGTTGACAAACCAAAGCTTCTTAATGCAGAAGTTTGGTATTTCTGTTGAGCCTGTAAATTTGGGCTCTGTTATTTGTGGAAAGCTGTGGTGCAGTAAGCATGCAATATATCCAAAAGGATTCAAGAGTCGTGTTAAGTTCTTTAGCATTCTTGATCCACCAAGAATTTGTAACTATCTTTCTGAAGTCTATGATGCTGGATTTCTTGGGCCTATTTTCAAGGTTACCATGGAAGAACTTCCAAATGAGGCTTTCACAAACACCTCAGCAGATAAGTGCTGGGAATCAGTTCTTGACAGACTAAATCATGAAATCAAAAGGCAAAGGAGTCAAGGTGAAATAGAACTTCCTTCCTTGGAACTTCTGCAAAGCATTAACGGTCACAAAATGTTTGGATTCCTTTCACCATCCATTATTCAGGCCATTGAAGCTGAGGATCCCAATCATCAATGCGTCGAGTACTGGAATCACAAAGAAGTTGTCTCTGAATCTTCAGGCAGTGCCATTGATGACTGTAAGTTCAGTCATGGTTCAAGCAACTCCCTAGGTGATGCCAAGACCAAGCTTTTTGATGCTGGTTTGATAAGGCAGGAGCAAGATAGCATCATAGGAAGTTATGATTCTTTTGAAGAGATGAAATTGGTGCTACAAGGATTCTTGAAAAAAGCAAGTTCTGATGAATTAAGTGCCATGCATAAGTTATTCAGCTCTGATGCACAGTTCACTAAGTGCAGAGCGGAATTTGTGTCGCTGATAGAAGAAATCCAGAAAGCTTGTGCATAA 3363 0.4071 MGDVVELRLMMMVLPSMRLMEGPPKVTKREKKQKNKWQFCPQIAFEDKGETVLWNVSLANWDSDKLKLAAESHAKEDNPCRHKPEMENTLESSGSPRHRKISARWDPDEACQPIVDEAPVFYPTIEEFEDTLGYIAKIRPQAEPYGICRIVPPACWVPPCPLQEKDLWENAKFPTRIQQIDLLQNREPMRKKIRGRKRKRRKQSKMGMGMRTAKSGSEANVASEPEEKFGFQSGSDFTLKDFQQYANVFKDCYFGLNDANEYEKVSDSSHQQRWKPSVEEIEGEYWRIIEQPTDEVEVYYGADLETGSLGSGFPKTSSLTKNESDRYALSGWNLNNFPRLPGSALCFEGSDISGVVVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVAGSHAPGLEDAMRKHLPDLFEEQPNLLNELVTQLSPSILKSEGVPVHRTIQHSGEFVVTFPRAYHCGFNCGFNCAEAVNVAPVDWLVHGQNAAELYSLQCRKTSLSHDKLLFGCAQEAMHALAELTLHGKENLKYIKWRSACGKDGVLTKAVKTRITMEKERLDCLPTHLKMLRMDSKFDLFEERECFSCFYDLHLSAIGCKCSPDCYSCLKHSNLFCSCEMDNRFILFRYTMNELSTLVEALEGESHAIEVWANRNSGMVSANAEDACIYKQDVESAICQTQSYKEGKNSTCAGTNDKSNSTILSSSYSHISAELVHSEFHHETFSAPYGTKDCHKDNLNEKDLVMDNKVMVEKGGSVDLNIDVMSGEPENYFLHAADYHHNKGVPYVEKVSFAEARKEQDNMEPGADCIAAKEFSSCSRDVQNSCTLDGYKLFGVDLQMHSDSGEQLNSVSKIGDAETSNTSISLTNQSFLMQKFGISVEPVNLGSVICGKLWCSKHAIYPKGFKSRVKFFSILDPPRICNYLSEVYDAGFLGPIFKVTMEELPNEAFTNTSADKCWESVLDRLNHEIKRQRSQGEIELPSLELLQSINGHKMFGFLSPSIIQAIEAEDPNHQCVEYWNHKEVVSESSGSAIDDCKFSHGSSNSLGDAKTKLFDAGLIRQEQDSIIGSYDSFEEMKLVLQGFLKKASSDELSAMHKLFSSDAQFTKCRAEFVSLIEEIQKACA 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01697 1120 ProSiteProfiles FYR domain FYRN motif profile. 868 926 IPR003888 GO:0005634
Gma05g01697 1120 MobiDBLite consensus disorder prediction 72 100 - -
Gma05g01697 1120 PANTHER LYSINE-SPECIFIC DEMETHYLASE 72 1119 - -
Gma05g01697 1120 ProSiteProfiles JmjC domain profile. 326 492 IPR003347 -
Gma05g01697 1120 MobiDBLite consensus disorder prediction 192 207 - -
Gma05g01697 1120 SMART cupin_9 326 492 IPR003347 -
Gma05g01697 1120 SMART fyrc_3 932 1027 IPR003889 GO:0005634
Gma05g01697 1120 SMART fyrn_3 882 926 IPR003888 GO:0005634
Gma05g01697 1120 Pfam F/Y-rich N-terminus 879 923 IPR003888 GO:0005634
Gma05g01697 1120 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 72 1119 - -
Gma05g01697 1120 ProSiteProfiles JmjN domain profile. 118 159 IPR003349 -
Gma05g01697 1120 MobiDBLite consensus disorder prediction 192 226 - -
Gma05g01697 1120 Pfam JmjC domain, hydroxylase 359 475 IPR003347 -
Gma05g01697 1120 Pfam F/Y rich C-terminus 930 1017 IPR003889 GO:0005634
Gma05g01697 1120 SUPERFAMILY Clavaminate synthase-like 237 513 - -
Gma05g01697 1120 SMART JmjN_1 117 158 IPR003349 -
Gma05g01697 1120 Gene3D Cupin 103 476 - -
Gma05g01697 1120 Gene3D - 874 1012 - -
Gma05g01697 1120 Pfam jmjN domain 119 152 IPR003349 -
Gma05g01697 1120 Pfam C5HC2 zinc finger 582 634 IPR004198 -
Gma05g01697 1120 ProSiteProfiles FYR domain FYRC motif profile. 928 1018 IPR003889 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01697 Gma-Chr5 38714578 38724602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01697 71 683 JUMONJI Transcription Factor Family AT1G30810 60.932 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma05g01697 JmjC 1.6e-43 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01697 - - gmx:100784581 2152.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01697 05 38714578 38724602 Gma05g01697 05 38714578 38724602 ECH
Gma05g01697 05 38714578 38724602 Gma08g01182 08 10082814 10090324 GST