Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01691 ATGGTTTCATCAGCTTCTCCACATTGGCGTAGTGGACCAGAAGACAAGTCAGTGTTGTGCAACGCATGTGGACTAAGATACACCAAATGGGGAAGCATTGGCCTTCAGAACTATTTTCCCAACCATTTTAAACCTGAGTATCTTGATAACCTTAAAAATCTAGAGGGTAGAAACAATGTTCTCCAAGGTTCAAGCTATGCTACAGATTCAAGTAATGCTACTAGTGGAAAAATCCATGTTATGTGGAATCCTTATGTTCCATCAAGGAAACGTTCACGCGTAGTACGGATGACAACATCAATCCAAAGGTTTCATGAACAACTTCTCATGATGTGGAAAAATGAAGAGAACTCAAATGATCAGTCATCCCAAGAATCAGAAGAGGTCTTATTGATTGATAACGTCAATAACTTCATACCTTGTAACGAAATAGGGCTTGGATGCATTCTTCTTAAACCAGAAGATGCTTCTGCATAG 477 0.3941 MVSSASPHWRSGPEDKSVLCNACGLRYTKWGSIGLQNYFPNHFKPEYLDNLKNLEGRNNVLQGSSYATDSSNATSGKIHVMWNPYVPSRKRSRVVRMTTSIQRFHEQLLMMWKNEENSNDQSSQESEEVLLIDNVNNFIPCNEIGLGCILLKPEDASA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01691 158 CDD ZnF_GATA 6 31 IPR000679 GO:0006355|GO:0043565
Gma05g01691 158 PANTHER GATA ZINC FINGER PROTEIN 1 158 - -
Gma05g01691 158 Pfam GATA zinc finger 5 30 IPR000679 GO:0006355|GO:0043565
Gma05g01691 158 Gene3D - 3 128 IPR013088 GO:0006355|GO:0008270
Gma05g01691 158 PANTHER OSJNBB0038F03.10 PROTEIN 1 158 IPR044589 -
Gma05g01691 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01691 Gma-Chr5 38634518 38635072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01691 4 46 C2C2-Gata Transcription Factor Family AT5G47140 51.163 2.96e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma05g01691 GATA 2.7e-09 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01691 - - gmx:102667887 300.441