Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01658 ATGGCACTTTGTATGCAGAGTCAGCAGAGAGATTCAGCATCAAACAAGCTGCTCATGGATTGTGGCAAGTATGTGAGGTACACACCTGAACAGGTGGAGGCTTTGGAGAGGGTGTATGTTGAATGTCCAAAGCCTAGTTCTTCCAGAAGGCAACAAATCATTAGGGAGTGTCCACTCCTTGCTAACATTGAAACAAAGCAGATCAAAGTGTGGTTCCAGAATCGCAGATGTCGTGAAAAGCAGCGGAAGGAAGCCTCTCGTCTGCAGACAGTGAATAGAAAGCTGTCTTCAATGAACAAGTTGTTAATGGAAGAGAACGACCGACTGCAGAAGCAGGTCTCACAGTTGGTTTATGATAATGGATTCATGAAACAACAAATACATACTGCATCTGCTACTACTACTACTACTACTGACAATAGCTGTGAGTCTGTGGTAGTGAGTGGTCAACACCAACCGCAAAACCCCAAAACTCAGCATCCCCAGTGGGATGCCAACAACCCAGCTGGTCTTCTTGCTATTGCTCAGGAGACCCTAGTGGAGTTCCTTTCCAAAGCTACTGGAACTGCTGTCAACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATTGTTGCTGTTTCCCGCAACTGTAGTGGCGTAGCGGCAAGAGCCTGTGGCCTTGTGAGCCTAGAGCCCACAAAGGTTGCCGAGATTCTCAAAGATCGTCCATCATGGTATCGTGACTGTCGATGCCTCAATGTATTGAGTGTAGTCTCCGCAGGGAATGGGGGCACAATAGAGCTTATGTACATGCAGACATATGCACCAACAACATTGGCAGCTGCAAGAGACTTCTGGACTCTGAGATACTCTACTAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAGAGGTCCTTGACTTCTTCAACTGGTGGCCCCACAGGGCCAGCTGCTTCAAACTTCATACGAGCTGAAATGCTTCCCAGTGGCTATCTAATTAGATCCTGTGAGGGTGGTGGATCTATCATTCACATTGTTGATCATGTTGATTTAGATGTTTGGAGTGTTCCTGAAGTACTTAGACCCCTCTATGAATCACCAAAATTCTTGGCTCAGAAATTGACTACTGCTGCATTGCGACATGCAAGACAAATTGCACAGGAATCAAGTGGAGATGTTCATTATGGTGGGGGTCGTCAACCTGCTGTCTTGAGGACATTTAGTCAAAGGCTTTGCAAAGGGTTCAATGATGCTGTCAACGGGTTTGTGGATGATGGTTGGTCACTGATGGGTAATGATGGGGTGGAAGATGTGACCATAGCCATAAACTCGTCTCCCAACAAGTTTTTCGGTTCCCATTACAATACATCAATGCTTCCAGCATTTGGAGGTGGGGTCATGTGTGCCAAGGCATCAATGCTGCTACAGAATGTTCCTCCTGCTTTGCTTGTTCGTTTTCTGAGGGAGCATCGTTCAGAGTGGGCTAATTATGAAGTTGATGCATACTCTTCTGCATGTCTCAAAGCTAGTCCTTATGCAGTTCCTTGTGCAAGACCTAGTGGTTTCCCAAGCAGCCATGTCATTATACCACTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGTATTGAGGGTAATGCATTTCCCCCTGATGATGTAGCTTGGGCATGTGATATGTATCTAATGCAGCTGTGCAGTGGAATTGATGAAAATGCAATTGGAGCGTGTGCACAGCTTGTGTTTGCACCTATTGATGAATCATTTGCAGATGATGCTCTCTTACTGCCTTCTGGTTTCCGTATCATACCATTGGATCCTAAAACAGATGGTTTGGCTTCAACTAGGACATTGGACTTAGCATCAACACTGGAAACAGGATCTGGTAATGCCCGCTCAGCTGGTGAAAGTGACTCGAATAACTACAACCTTAGGTCGGTCCTCACAATTGCATTCCAATTTACCTTTGAGAACCATTTGCGGGACAATGTGGCTGTTATGGCTCGCCAGTATGTGCGTAATGTTGTGCGATCTGTTCAGAGGGTTGCCATGGCAATTGCTCCCTCTAGGCTCAGTACACAGTTGGGGCCAAAGTCATTTCCTGGTCCACCAGAGGCTCTTACCTTAGCAAGATGGATCTGCAGAAGCTACAGGCTCCACACCTGCACAGAGCTTTTCAGCGTTGAGTCCACATCTGGTGATGCAATCTTGAAACAACTTTGGCACCATCCAGATGCAATATTGTGCTGTTCTGTAAAAACAGATGCATCTCCGGTGTTCACCTTTGCAAACCAAGCTGGACTTGACATGCTTGAAACCACTCTTGTTGCTCTTCAAGACATAATGCTGGATAAAGTTCTTGATGAAGCTGGCAGGAAGGTTCTCTGCATTGAGTTCTCCAAGATAATGCAACAGGGATTTGCATATCTGCCAGCAGGAATATGTGTATCAAGTATGAATCGACCAGTGTCTTATGAGCAGGCCATTGCATGGAAAGTTCTCGATGATGATGATTCCAATCACTGCCTTGCCTTCGTATTCATGAACTGGTCTTTTGTCTGA 2562 0.459 MALCMQSQQRDSASNKLLMDCGKYVRYTPEQVEALERVYVECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREKQRKEASRLQTVNRKLSSMNKLLMEENDRLQKQVSQLVYDNGFMKQQIHTASATTTTTTDNSCESVVVSGQHQPQNPKTQHPQWDANNPAGLLAIAQETLVEFLSKATGTAVNWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLNVLSVVSAGNGGTIELMYMQTYAPTTLAAARDFWTLRYSTSLEDGSLVICERSLTSSTGGPTGPAASNFIRAEMLPSGYLIRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESPKFLAQKLTTAALRHARQIAQESSGDVHYGGGRQPAVLRTFSQRLCKGFNDAVNGFVDDGWSLMGNDGVEDVTIAINSSPNKFFGSHYNTSMLPAFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWANYEVDAYSSACLKASPYAVPCARPSGFPSSHVIIPLAHTIEHEEFLEVVRIEGNAFPPDDVAWACDMYLMQLCSGIDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLDPKTDGLASTRTLDLASTLETGSGNARSAGESDSNNYNLRSVLTIAFQFTFENHLRDNVAVMARQYVRNVVRSVQRVAMAIAPSRLSTQLGPKSFPGPPEALTLARWICRSYRLHTCTELFSVESTSGDAILKQLWHHPDAILCCSVKTDASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKVLCIEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLDDDDSNHCLAFVFMNWSFV 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01658 853 Gene3D - 207 389 IPR023393 -
Gma05g01658 853 Gene3D - 19 89 - -
Gma05g01658 853 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 8 853 - -
Gma05g01658 853 CDD bZIP 75 114 - -
Gma05g01658 853 CDD homeodomain 23 83 IPR001356 GO:0003677
Gma05g01658 853 Coils Coil 92 112 - -
Gma05g01658 853 ProSiteProfiles START domain profile. 164 364 IPR002913 GO:0008289
Gma05g01658 853 SMART HOX_1 20 86 IPR001356 GO:0003677
Gma05g01658 853 Pfam Homeodomain 24 81 IPR001356 GO:0003677
Gma05g01658 853 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 8 853 IPR044830 GO:0003700
Gma05g01658 853 CDD START_ArGLABRA2_like 168 384 - -
Gma05g01658 853 Pfam START domain 174 382 IPR002913 GO:0008289
Gma05g01658 853 SUPERFAMILY Homeodomain-like 23 85 IPR009057 -
Gma05g01658 853 Pfam MEKHLA domain 708 852 IPR013978 -
Gma05g01658 853 ProSiteProfiles 'Homeobox' domain profile. 26 82 IPR001356 GO:0003677
Gma05g01658 853 SMART START_1 173 383 IPR002913 GO:0008289
Gma05g01658 853 SUPERFAMILY Bet v1-like 174 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01658 Gma-Chr5 38282091 38288089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01658 19 853 Homeobox Transcription Factor Family AT2G34710 76.639 0.0 1332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma05g01658 START 5.7e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01658 K09338 - gmx:100806322 1709.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01658 05 38282091 38288089 Gma08g01147 08 9688607 9694793 GST