Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01653 atggcttcctcggccttgacccaaagcagctccttttcgtatgacgtgtttctcagcttccacgctacagacacacgcagcaacttcacagactttctttttcaagctctcataagaaaaggcatcgttgccttcaaagacgaatccagagcacccgaccaagcgattgaggattctcgccttttcattgtggtcctttccaagaactatgctttctccactcagtgtttgcatgaactatcacagatcttccattgcgttgaattttcgccaagacgtgttctgcctattttttatgatgttgatccatcagatgtgcgaaaacagactggatggtacgagaaagccttttcgaaatacgaagaaagattcttggtaaataaaaaggggatggagacagtgcagacatggagaaaagctctgactcaagtggccaatctctctggttggtatatccgaaataagcctcaatatacagagattgaagaatttgttcaatatacaataagtatattgagttctaaattttcaactcttcaaaataaagcagagggaacattgtcagataaagatgaattttcatacaatgagctgtcaggtgaagcagagggaacattgtcagataaagatgaattttcatacaatgagctgtcaggtgaagcggagggaacattgtcagataaagatgaattttcatacaatgagctgtcaggtTTGATGAGGATAAGAGATTTTATCAGCCTTGTGTTGACTTATCCTGTGAAATTAGTAGAGGAAGATATTTTAAGATCTTGGATTAGTGCATTTCCTGAATGGAAAGCTCAGTTATTGTCCACTGGTGATGATACTGTTATGGACAAACCATGGTGTGTACTAACAAAGAAGGCACTGGGATCTATGAAGGGATTTATGCCAATGGAAATAATAAGTAAAGTAGAACGTGGTAGGAGATCCATCTTCAGCCGCAATGATGTTGAGGCAATACCAGAAGCCATTCTCCACCAAACTGTTGACCTCGCAGTTAACCAACTAATTCAAACTTTGTTTTGTGGGGATTACTGTTCACGCTATATCAGACTGTTAACCAGAAACTTGGCTGAAAAAAGATATGTAGTGGACAAAATAGTTGCAGCCGTTGAAGATAAGCACAACATGTTCGGAATTGACAAAGATTTTCTTAGAGCCCTATGGATCAATGCCTCAACATATGAGACTGATGCAGAGTTTCGAGTTCAAGAAGAAATCAATACGATGATGGAAGTTGATGACATGTGGCCGATGGAAGTTGATAACATGTTGGGTACACTTTTCATTGAAGAAAAGATGGGAAGCAATGGGCAGTTGGTGATTGTAGTGGATGCAGATAGCAACAAGAAGCTGGACCTCCAAAAGTTGCGTTTTCCAACTGGAATTGTGGTGTTGATAACAACTGAGCCGTCAACACAAGCAGAGAAAGATGGTGACTTCAGAATTGCATGCACAATGGATTTGAATATTTGGACCCAGGATCATCTATTGCCTTGGAAAGTCTTCTGCAGCTATGTGGGCAGTTGTATCAGCAGTAGCATGGTAAGTTCATCAATGGCCATTCAGAAAATTGCAGTGGAAATAGTTAAGGAATGCCATGGTCATCTTCTTGCCATTGTCCTTTTGTCAAAGTATCTTATGTATGTGCAAGATTTTAAACAGTGGGAACTTGCACTTGACAAATTAAGCAGTCTGAATCCTTCCTATGATTATCAAGATAGTGACCGAATTGGCATTAGTAGAGTCATGGTCAATGCATTCGTAAATATTATCTGGGAAGACATTGATGATGCACAAAAGCTTTGCCTTGAACTCAGTTTGCCTGTTCACAACATTAAAAATGGGGTGAGAGATGATATCTTGGTGTCTGATTGGGCCAAGATAATATTAGGATACACGCAAGAACTTGGTGAATACAGAAGGCAATTACAATATCACATGAAGGAGCTTCTAGACCGTTTTGTCTTGTTGAAATATGAAAGTGGAGATGTCTATTTGCCAATAGAAACCTATGATATAATAAAATCATTGCACACCTCAAAGCCTTCCATCCTAAGGCATGGTGCATTAGGATTGACGGAGCCACCCTACATTGGACGATGGCATAGTCTTATTCGGATAGAATTGATGGACAATAAAATATGTGAATTACCACAATCACCAGATTGCCCTAAACTCAAAGTGTTGTTGTTGCAGGGCAATGTTGATTTGATGGATATCCCTGACTCATTTTTCAACCACATGCCCCTGCTTCAACACTTGGACTTATCCTACACTAGTATAAGGGATTTACCCCCTTCTGTCTCTAAATTAATACAACTTCAGAAATTTTATCTTAGAGGCTGTGATCTCTTCATGGAACTACCACATCAGATTGGACAGCTAAAGAATCTCAAAGAGCTTGATCTTGATGGGACTTTGATCACCCATCTGCCAATAGAGATCCGAGAATTGATCAACCTGCAAATCTTAAGCCTCTGCTTTGATGGAACTTCCAGGTCAACAATTATTCCTCCAGGATTGGTATCAAATCTTACTCAATTGAATTATTTAAGCATCAACGTTGACCCTGAAGATGAGCAATGGAATGAGAATGTTATTAGTGTTTTGGGGGAAATTTTTTTTGGATTATGGAATTTGCAGAGGTTGAGTATATATATCCCAAAGGCTGACCTCTTGGAATTCATACCAGCCGAAAAATCTCTCAATTTCAGATTGGTTGTTGGTCAACATATGCGACGTTTAATATCGCGTGTACCACCTGAACTGGAGACAAAATTTAAACACTGTGACTATAGCATAAAGTTTGTTAATGGTGTGAATATTCCAAATGGAGTGAAAATGAATCTTGGGCGCTTCAAAGCCTTGTACCTAGACCGACATATGACCATCAAGAGTCTCTCTGATTTTGATTTGAGGAATTTATGGGGGTTGGAAGTATGCATATTGGCAGAGTGTAATGAAATGGAAACAATTGTCAGTGGAAGCAATTCACCTGATGGGCCAGCTTCTCTAATGTTGAAGTTTTTGAGTGTATTCTATATGAAGAATTTAAGAAGCGTCTGCGAAGGGAGTAGTCCCTTCTTTCTCTTCTTAAAGTCTATAGCATTACACACTTGCCCCATGTTAACTACCATCTTCACCTTAGATTCTCTTAAAAAACTTTCCTTTTTGGAGGAGATTATTGTTGAAGACTGTCCAAAACTAACCACCCTGATAAGTCATGCCACACCAGAACAAAAACCAGTGTTTTTCCTCCCCAAGTTGAGAATAATATCACTTCTCTATCTTCCTGAATTGGTCAACATTTTTAATGGCATGCATGTTGGACCTTTTATAGAAGAAATGATATTTTATTATTGCCCAAGACTCCAAAGTCTTTCCAAATCTGAGTTGTCAAGCAAATCTTTGAAGATCATCAAAGGTGAAAGCATCTGGTGGGAAGCATTGAAATGGAATGAAGCAGAGTGGGGAGATGCTGGTCGACCCAATTATTTTGAGCGAATTTTTTCACCAATTAATGAGGAGGCTGACATGATGAACCAACTAGCTGCACTTCAAGAGACTCAACTAAATGAATATCACAATACGACATATCAGggaatttcaagttctaaacagtcgatagcaaaaatAttagccccagtttcatctgtgggtaggggtagttcaaacagtgaagcccaaaagcggaaagtcgttgctgagccaaagatatttcaagaggtaacaaaaaagGGTTATAAACGAAGAGAAGTTTGGACAGCAAAGATACGTGTCAATGCGGAAGGGTGTTATGATGATGGATATATCTGGAGAAAATATGGGAAAAGGCAAATTCTTGGAGCTAAGTATCCAAGAGAATATTACAGATGCGCACATAAATTTGTACATTGGTGCCCAGCAAGAAAACGAGTTCAAAGGTTAGACGAAAACCCAGCAACAATTGAGATAATCTACGAGCACAGACATACATGCGCCAGAGAACAGAATTTGATCATTAAGAGTGGGGATGAGGCAAGTCAATCCTGCAAGTTATAA 4068 0.3092 MASSALTQSSSFSYDVFLSFHATDTRSNFTDFLFQALIRKGIVAFKDESRAPDQAIEDSRLFIVVLSKNYAFSTQCLHELSQIFHCVEFSPRRVLPIFYDVDPSDVRKQTGWYEKAFSKYEERFLVNKKGMETVQTWRKALTQVANLSGWYIRNKPQYTEIEEFVQYTISILSSKFSTLQNKAEGTLSDKDEFSYNELSGEAEGTLSDKDEFSYNELSGEAEGTLSDKDEFSYNELSGLMRIRDFISLVLTYPVKLVEEDILRSWISAFPEWKAQLLSTGDDTVMDKPWCVLTKKALGSMKGFMPMEIISKVERGRRSIFSRNDVEAIPEAILHQTVDLAVNQLIQTLFCGDYCSRYIRLLTRNLAEKRYVVDKIVAAVEDKHNMFGIDKDFLRALWINASTYETDAEFRVQEEINTMMEVDDMWPMEVDNMLGTLFIEEKMGSNGQLVIVVDADSNKKLDLQKLRFPTGIVVLITTEPSTQAEKDGDFRIACTMDLNIWTQDHLLPWKVFCSYVGSCISSSMVSSSMAIQKIAVEIVKECHGHLLAIVLLSKYLMYVQDFKQWELALDKLSSLNPSYDYQDSDRIGISRVMVNAFVNIIWEDIDDAQKLCLELSLPVHNIKNGVRDDILVSDWAKIILGYTQELGEYRRQLQYHMKELLDRFVLLKYESGDVYLPIETYDIIKSLHTSKPSILRHGALGLTEPPYIGRWHSLIRIELMDNKICELPQSPDCPKLKVLLLQGNVDLMDIPDSFFNHMPLLQHLDLSYTSIRDLPPSVSKLIQLQKFYLRGCDLFMELPHQIGQLKNLKELDLDGTLITHLPIEIRELINLQILSLCFDGTSRSTIIPPGLVSNLTQLNYLSINVDPEDEQWNENVISVLGEIFFGLWNLQRLSIYIPKADLLEFIPAEKSLNFRLVVGQHMRRLISRVPPELETKFKHCDYSIKFVNGVNIPNGVKMNLGRFKALYLDRHMTIKSLSDFDLRNLWGLEVCILAECNEMETIVSGSNSPDGPASLMLKFLSVFYMKNLRSVCEGSSPFFLFLKSIALHTCPMLTTIFTLDSLKKLSFLEEIIVEDCPKLTTLISHATPEQKPVFFLPKLRIISLLYLPELVNIFNGMHVGPFIEEMIFYYCPRLQSLSKSELSSKSLKIIKGESIWWEALKWNEAEWGDAGRPNYFERIFSPINEEADMMNQLAALQETQLNEYHNTTYQGISSSKQSIAKILAPVSSVGRGSSNSEAQKRKVVAEPKIFQEVTKKGYKRREVWTAKIRVNAEGCYDDGYIWRKYGKRQILGAKYPREYYRCAHKFVHWCPARKRVQRLDENPATIEIIYEHRHTCAREQNLIIKSGDEASQSCKL 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01653 1355 SMART LRR_typ_2 757 780 IPR003591 -
Gma05g01653 1355 SMART LRR_typ_2 804 827 IPR003591 -
Gma05g01653 1355 Gene3D WRKY domain 1264 1337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01653 1355 SMART till_3 13 147 IPR000157 GO:0007165
Gma05g01653 1355 Pfam TIR domain 14 175 IPR000157 GO:0007165
Gma05g01653 1355 Pfam Leucine rich repeat 733 793 IPR001611 GO:0005515
Gma05g01653 1355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 612 IPR027417 -
Gma05g01653 1355 Pfam WRKY DNA -binding domain 1276 1335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01653 1355 SMART WRKY_cls 1275 1337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01653 1355 Gene3D - 507 583 IPR042197 -
Gma05g01653 1355 SUPERFAMILY WRKY DNA-binding domain 1273 1336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01653 1355 Gene3D Ribonuclease Inhibitor 958 1155 IPR032675 -
Gma05g01653 1355 Gene3D Ribonuclease Inhibitor 677 913 IPR032675 -
Gma05g01653 1355 SUPERFAMILY L domain-like 700 1137 - -
Gma05g01653 1355 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 150 IPR035897 -
Gma05g01653 1355 Gene3D - 7 178 IPR035897 -
Gma05g01653 1355 ProSiteProfiles TIR domain profile. 12 172 IPR000157 GO:0007165
Gma05g01653 1355 ProSiteProfiles WRKY domain profile. 1270 1333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01653 1355 PANTHER - 591 1170 - -
Gma05g01653 1355 PANTHER PROTEIN LAP1-LIKE 591 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01653 Gma-Chr5 38222765 38232766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01653 1190 1335 WRKY Transcription Factor Family AT2G40740 34.000 3.11e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g01653 TIR 3.8e-28 CL0173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01653 - - gmx:102661979 2462.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01653 05 38222765 38232766 Gma05g01653 05 38222765 38232766 ECH