Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01632 ATGCCTCGTAAAGTAaattacggactcgattacgacgacgatttctatgatgatgattatgatgactatgcttatgatgatgccgatgcagaagactatgAAGGACCTGATACAAAGCAAGAGACCATTAAGCCTGGGCTTTGGCAATGCTCCATTTGCACTTATGACAACGATGAGAGTATGACTTTTTGTGATATTTGTGGTGTTGTACGCCGTTCCTTGGTTAACACTGGAACTTCCAACAGTAACAAAACAGTTGAAGACATAAGCAAAAGTCCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTTCAATCATTACAACAACAGATTCCCAAAGAGATTGTATTATTTCCAAAGCCAGATGATGGTTTTCTGACAGATGACAGTAACTTCTACAAGCTTGAAAATGTCCGAGGAGAATTTCATGAAATTCATAAGGCTTTTAGTACTCAAAGCCATCCACATTTAAACATAGATCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTATACTGGCCTACGTTCTTCCAAAACGGGTTTGAAAGACAAAGCTACAAACACTAAAAGTTCTCAGCTTTCATCAAGCATCAGAGAGAAGAATGAACTTTCTGTACAATCAAATGCTGAAAGTTCTGACAACTTATCATCCTTAACGCGAAAGAGCAAACAGGATAGTTCAGCTAAGAGCAAGCTTTCCAAAAATGTAGCAATTGATCTACAAACAAGTGGTAAAACTTCAAACAGCTTGCCAGAATCTTTGTCAAAAGACAAAGGTAACAATATTAATAAAATAAATTCTTTGAAAAATGGTACAATTGATATTCAATCAAGCAAAGAAAAGTCAGGTAGTTTGTCTGCACTGTCAAAAGTCAAGGAAAGTGATAACATTAGTTTCTCTTCTATCAAAGATGGAAAACCTGAAAGTATTTCCAGCAGTTTCAACAATATGGCTCTCAATGTAAGATCTGGAAATTCATCTGGAAATTCTGATAATACTAATGCTAAGGGAACTCGCTCACATGTTTCTTATAAGCCAGAAAAATGGATGCTCCCTCAACAAGCTGAAGATACATTGACTCAGCTGAATCTTGCAATTGTTGGCCATGTTGATTCTGGAAAATCAACTCTATCTGGTAGGTTACTGCACCTATTGGGACGGATTTCCCAGAAAGAAATGCACAAATATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGAGAAAGGGGGATAACTATGACAGTGGCTGTTGCTTATTTTGACACCAAGAGATATCATGTTGTTGTGCTCGACTCCCCTGGCCATAAAGATTTTGTCCCAAACATGATATCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTTCATTTGAAGCTGGTATGGATGGCAGCAAAGGGCAAACAAGGGAGCATGCACAACTTATCAGAAGCTTTGGTGTTGATCGGGTTATAGTTGCTGTAAATAAGATGGATGCTGTTGTGTACTCCAAAGATCGATTTGATTTTATAAGGCAGCAGCTGGGAGTTTTTCTCCACTCTTGTGGTTTCAAAGATTCTTCGCTATCTTGGATTCCCATGAGTGCTATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGATGCCCGTTTAAAAAACTGGTATGGTGGACCTTATCTATTAGATGCAATTGACTCTCTCCAACCTCCTACTAGAGAATTCTCAAAACCTCTACTAATGCCAGTATGTGATGTCATCAAATCAACTACACTTGGGCAGGTGTCTGCCTCTGGTAAACTAGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTGGTTATGCCTTCAGCTGTTGTGGGAACAGTACGTTCATTGGAGCGTGACTCTAATGCTTGTACTGTTGCAAGAGCTGGAGATAATGTAGCTGTAATGTTGCAAGGTGTCGATGGAAATCATGTGATGGCAGGAGATGTATTATGCCATCCTGACTTTCCTGTTGCAGTTGCTAAGCATTTGGAGTTGAAAGTGCTAGTGTTGGATGGTGCAAGTCCCATATTGGTGGGCACACAGTTAGAGTTTCACATACACCATGCGAAGGAACCTGGTAGAGTTTCAAGAATATTATCAGTACTTGATCCCAAGACGGGTAAGGTGACCAAAAAGTCACCCCGCTGTCTCACTGCAAAGCAAAGTGCAGTAATTGAGGTGATTTTGAATGAGACAGTCTGTGTGGTAGAGTTCTCTAGTTGTAAAGCTCTTGGAAGGGTGTCCCTAAGATCAATGGGAAGAACGATTGCTGTTGGAGTTGTGACAAGAATAATTGAAGAACAAGGTTAA 2379 0.3905 MPRKVNYGLDYDDDFYDDDYDDYAYDDADAEDYEGPDTKQETIKPGLWQCSICTYDNDESMTFCDICGVVRRSLVNTGTSNSNKTVEDISKSPGASKLARSLFQSLQQQIPKEIVLFPKPDDGFLTDDSNFYKLENVRGEFHEIHKAFSTQSHPHLNIDPFKFDVPSPDDVVYTGLRSSKTGLKDKATNTKSSQLSSSIREKNELSVQSNAESSDNLSSLTRKSKQDSSAKSKLSKNVAIDLQTSGKTSNSLPESLSKDKGNNINKINSLKNGTIDIQSSKEKSGSLSALSKVKESDNISFSSIKDGKPESISSSFNNMALNVRSGNSSGNSDNTNAKGTRSHVSYKPEKWMLPQQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKRYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVDRVIVAVNKMDAVVYSKDRFDFIRQQLGVFLHSCGFKDSSLSWIPMSAMENQNLVASPSDARLKNWYGGPYLLDAIDSLQPPTREFSKPLLMPVCDVIKSTTLGQVSASGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVMLQGVDGNHVMAGDVLCHPDFPVAVAKHLELKVLVLDGASPILVGTQLEFHIHHAKEPGRVSRILSVLDPKTGKVTKKSPRCLTAKQSAVIEVILNETVCVVEFSSCKALGRVSLRSMGRTIAVGVVTRIIEEQG 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01632 792 SMART zf_4 46 70 IPR001876 -
Gma05g01632 792 PANTHER OS04G0595300 PROTEIN 54 790 - -
Gma05g01632 792 CDD EF1_alpha 365 584 - -
Gma05g01632 792 Pfam Elongation factor Tu GTP binding domain 364 580 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 Pfam Elongation factor Tu C-terminal domain 680 787 IPR004160 -
Gma05g01632 792 SUPERFAMILY Ran binding protein zinc finger-like 46 71 IPR036443 -
Gma05g01632 792 Pfam Elongation factor Tu domain 2 610 674 IPR004161 GO:0005525
Gma05g01632 792 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 684 788 IPR009001 -
Gma05g01632 792 CDD HBS1_C_III 679 787 - -
Gma05g01632 792 Gene3D Translation factors 589 678 - -
Gma05g01632 792 Gene3D - 352 585 IPR027417 -
Gma05g01632 792 PRINTS GTP-binding elongation factor signature 365 378 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 PRINTS GTP-binding elongation factor signature 424 432 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 PRINTS GTP-binding elongation factor signature 444 454 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 PRINTS GTP-binding elongation factor signature 460 471 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 PRINTS GTP-binding elongation factor signature 505 514 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 361 592 IPR000795 GO:0003924|GO:0005525
Gma05g01632 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 606 IPR027417 -
Gma05g01632 792 Gene3D Translation factors 682 791 - -
Gma05g01632 792 ProSitePatterns Zinc finger RanBP2-type signature. 48 67 IPR001876 -
Gma05g01632 792 PANTHER TRANSLATION FACTOR 54 790 - -
Gma05g01632 792 ProSiteProfiles Zinc finger RanBP2 type profile. 44 73 IPR001876 -
Gma05g01632 792 CDD HBS1-like_II 591 675 - -
Gma05g01632 792 Gene3D - 40 86 - -
Gma05g01632 792 SUPERFAMILY Translation proteins 583 678 IPR009000 -
Gma05g01632 792 MobiDBLite consensus disorder prediction 182 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01632 Gma-Chr5 38077121 38084640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01632 46 83 Eukaryotic Initiation Factors Gene Family AT5G10630 55.263 7.35e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01632 05 38077121 38084640 Gma08g01116 08 9481926 9489261 GST
Gma15g00890 15 7404993 7408112 Gma05g01632 05 38077121 38084640 PCT
Gma13g01922 13 34508104 34511233 Gma05g01632 05 38077121 38084640 PCT