Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01630 ATGCCAGGGAACAATTATAACTGCGTCCCTTTAACACCAAGGTCTAGATTGGAAAGGCTTCTGAGGGAAAGAGAGCTAAGGAAATCCTTCAAGCTTATTCAACCAACGGAGGAAGCAAGAGATGGCAGCAAAGAGGGAGAACAATTTTATGGTGATTCATGCATAAGTGAGAATGAAATTTTGGGTATTCATAAAGAGGAAGAGGTCACGGAAACGAGTTTTACAGATAGAAGCCAAAGGCAAGATGAGAGGCCAAGCAAACAACGTTTGTTGGTGGTAGCTAACAGGTTGCCTGTGTCTGCTGTTAGGGAGGGTGTGGAGTCATATCGCCTTGAGATCAGTGTAGGCGGGCTACTTGTTGTTTTTGTTGAAGGTGTAAAGGAATTTGATACCAGATGGATTGGGTGGGCTGGTGTGAATGTGCCTGATGATGTTGGGCAGAGAGCATTGACAAAAGCTTTAGCTGAAATGCGATGCATACCAGTATTTCTTGATGAGGAGATAGTTAACCAGTACTATAATGGCTACTGCAACAACATCTTATGGCCTCTATTTCATTACCTTGGGCTTCCACAAGAAGATCGACTTGCTACAACTCGTACTTTCCAATCCCAATTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTAGTAAATAAGCATTATGAGAAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTACCTTCCAAAATGTTTAAAAGAATACAATGAACAAATGAAAGTTGGTTGGTTTCTCCATACACCCTTTCCTTCCTCAGAAATACATAGGACTCTACCGTCCAGATCAGAGCTGTTGAGATCTGTACTTGCAGCTGACCTGGTGGGATTCCACACCTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATTCTTGGGCTTGAGGGAACACCTGAAGGAGTAGAAGATCATGGGAAACTGACCCGTGTGGCTGCGTTTCCTATTGGGATTGACTCTGATAGATTCATTCAAGCCCTTGAACTCCCTGAAGTCCAGGAACACATGAAAGAACTGAAAGAAAGATTTGCTGGCCGAAAGGTAATGTTGGGTGTCGATCGTCTTGATATGATAAAAGGAATTCCCCAAAAACTCTTGGCATTTGAAAAGTTCCTTGAGGAGAATTCACTCTGGCGTGATAAAGTTGTCTTGCTGCAAATTGCTGTACCTACAAGGAAAGATGTTCCGGAATATCAAAAGCTTACAAGCCAAGTGCATGAGATTGTAGGACGCATCAATGGAAGATTTGGAACACTTACAGCTGTTCCAATACACCATCTGGATCGGTCACTTGACTTTCATGAATTATGTGCACTCTATGCTGTAACTGATGTAGCACTTGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCGTGTCAAGCATCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAACCCATGGAACATCACAGAGGTTGCTGCTTCTATTGGTTATGCGTTGGAAATGTCAGCTGATGAAAGAGAAAAACGACATCAGTTTAATTTCAAACATGTTGAAACTCACACGTCACAGGAATGGGCAGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCTCCATTACTTCCCAACAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGACTAATTATACTGGGTTTCAATGCCACTTTGAATGAACCAGTGGGAAGGGCTGGTCAAATTAGAGAATTGGAACTTAAATTACACCCAAATATGAAGGAACCTTTAAAGAAGTTAACCGATGATCCAAAGACAACAATAGTTGTTCTGAGTGGGAGCTCTCGAGCAGTCCTGGACAAAAACTTCAGTGAATTTAACATGTGGTTGGCAGCAGAAAATGGAATGTTTTTGCGACGTACTTCAAGTGAGTGGATGACAACCATGCCTGAAAATTTAAACATGGATTGGGTTGATAGTGTGAAGCATGTTTTTGAGTATTTTACTGAAAGAACTCCAAGGTCTCATTTTGAGCTTCGGGAGACGTCAGTAGTATGGAATTACAAGTATGCAGGCATGATTCAAGCAAGAGATCTGCTTCAACATCTGTGGACAGGGCCAATATCAAACGCATATCTTGATGTTGTCCAAGGTGGTCGATCTGTTGAGGTTCGCACAGTTGGCGTGTCAAAGGGAGCAGCTATTGATCGTATCCTTGGAGAGATAGTTCATAGTAAAGGCATGAAGACGCCAATTGACTATGTCTTATGCATTGGGCACTTTCTAGCCAAGGATGAAGATGTGTATACATTTTTTGAGCCAGAGCTCCCTTCTGAATCACCTCCATTACCAAGAGCTATGCTATCCAAATCTAATTCTTACAGGCCATCATCTCTGCCAAAATTACCAGCCACCAAAACCGGGTCGAAGGCAGCTAAATACAGGAAACAACGTTCGTTGTCAAACATAGAAAAGAGAGAAATTGATCAATGGAGACCAAAGTATCGTGATAAAATAGCACTGCATGAGGGTTCCTCAGTGCTTGATCTAAATGGTGATAATTACTTCTCTTGTGTTGTTGGACGGAAAAGATCAAGTGCACGTTACCTTCTTAAAACCTCAGATGATGTTGTCAACCTCTTAAGTGACTTGGCAGAACATTCTTCATCACCAACTTAA 2754 0.4176 MPGNNYNCVPLTPRSRLERLLRERELRKSFKLIQPTEEARDGSKEGEQFYGDSCISENEILGIHKEEEVTETSFTDRSQRQDERPSKQRLLVVANRLPVSAVREGVESYRLEISVGGLLVVFVEGVKEFDTRWIGWAGVNVPDDVGQRALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRTFQSQFDAYKKANQMFADVVNKHYEKGDVVWCHDYHLMYLPKCLKEYNEQMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLTRVAAFPIGIDSDRFIQALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSLWRDKVVLLQIAVPTRKDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALEMSADEREKRHQFNFKHVETHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLNEPVGRAGQIRELELKLHPNMKEPLKKLTDDPKTTIVVLSGSSRAVLDKNFSEFNMWLAAENGMFLRRTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSVVWNYKYAGMIQARDLLQHLWTGPISNAYLDVVQGGRSVEVRTVGVSKGAAIDRILGEIVHSKGMKTPIDYVLCIGHFLAKDEDVYTFFEPELPSESPPLPRAMLSKSNSYRPSSLPKLPATKTGSKAAKYRKQRSLSNIEKREIDQWRPKYRDKIALHEGSSVLDLNGDNYFSCVVGRKRSSARYLLKTSDDVVNLLSDLAEHSSSPT 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01630 917 CDD HAD_TPP 588 800 - -
Gma05g01630 917 CDD GT20_TPS 89 555 IPR001830 GO:0003824|GO:0005992
Gma05g01630 917 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 66 909 - -
Gma05g01630 917 Gene3D Glycogen Phosphorylase B; 337 540 - -
Gma05g01630 917 MobiDBLite consensus disorder prediction 815 836 - -
Gma05g01630 917 MobiDBLite consensus disorder prediction 66 86 - -
Gma05g01630 917 Gene3D - 612 766 IPR023214 -
Gma05g01630 917 Gene3D Glycogen Phosphorylase B; 80 336 - -
Gma05g01630 917 Gene3D - 676 752 - -
Gma05g01630 917 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 555 IPR012766 GO:0003825|GO:0005992
Gma05g01630 917 Pfam Glycosyltransferase family 20 89 555 IPR001830 GO:0003824|GO:0005992
Gma05g01630 917 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 66 909 IPR001830 GO:0003824|GO:0005992
Gma05g01630 917 MobiDBLite consensus disorder prediction 815 829 - -
Gma05g01630 917 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 558 - -
Gma05g01630 917 SUPERFAMILY HAD-like 611 768 IPR036412 -
Gma05g01630 917 Pfam Trehalose-phosphatase 612 803 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01630 Gma-Chr5 38057983 38066801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01630 1 916 Trehalose Biosynthesis Gene Families AT1G78580 73.312 0.0 1368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01630 K16055 - gmx:100816642 1787.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01630 05 38057983 38066801 Gma05g01630 05 38057983 38066801 ECH
Gma05g01630 05 38057983 38066801 Gma08g01113 08 9460863 9468920 GST