Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01618 ATGGCTGATTATTCAGCACGAACTGAATCCTGCGAGGTAGTTGTAAATGTAACCAAGGACACCTCCAAAACAATGGAACCCTCAGACTCCTTTGTCTCTGTTCCTTTCTTGCAGAAGTTGGTAGCTGAGGTGGTGGGAACATATTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAATAAGAACAACGACAACGTGGTAACACTTCCTGGGATAGCAATTGCTTGGGGGCTGGTTGTAACAGTGTTGGTTTACACTGTTGGTCACATTTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCTTCTACCAGAAGGTTCCCCTTGATGCAGGTACCAGCTTATGTAGCAGCTCAACTCCTAGGAAGCACACTTGCCAGTGGAACTCTGAAACTATTATTTATGGGGAAGCATGACCAGTTTTCAGGAACACTCCCAAATGGGACTAACCTGCAAGCTTTTGTGTTTGAATTCATAATCACATTTCTCCTTATGTTTGTCATATCCGGGGTTGCCACCGATAACAGAGCGGTTGGTGAGTTGGCTGGGATTGCAATTGGGTCTACAATACTGCTTAATGTGATTATTGGAGGGCCAGTGACAGGAGCATCAATGAACCCAGTTAGAAGCCTAGGACCTGCTATTGTACACGGCGAATACAGAGGAATATGGATATATTTGTTGGCACCGGTTGTGGGGGCCATAGCTGGAGCATTGGTATACAACACCATTAGGTACACGGACAAGCCATTGCGAGAAATCACCAAGAGTGCCTCTTTCCTCAAAGGCCGTGGTGGCTCCACATAA 816 0.462 MADYSARTESCEVVVNVTKDTSKTMEPSDSFVSVPFLQKLVAEVVGTYFLIFAGCASVVVNKNNDNVVTLPGIAIAWGLVVTVLVYTVGHISGAHFNPAVTIAFASTRRFPLMQVPAYVAAQLLGSTLASGTLKLLFMGKHDQFSGTLPNGTNLQAFVFEFIITFLLMFVISGVATDNRAVGELAGIAIGSTILLNVIIGGPVTGASMNPVRSLGPAIVHGEYRGIWIYLLAPVVGAIAGALVYNTIRYTDKPLREITKSASFLKGRGGST 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01618 271 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 PANTHER NODULIN-26 1 269 - -
Gma05g01618 271 SUPERFAMILY Aquaporin-like 32 258 IPR023271 -
Gma05g01618 271 Gene3D Glycerol uptake facilitator protein. 3 258 IPR023271 -
Gma05g01618 271 PANTHER AQUAPORIN NIP2-1 1 269 IPR034294 -
Gma05g01618 271 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma05g01618 271 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Gma05g01618 271 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01618 Gma-Chr5 37954406 37958729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01618 19 265 Major Intrinsic Protein MIP AT5G37820 60.643 1.85e-104 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01618 K09874 - gmx:100813448 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01618 05 37954406 37958729 Gma05g01618 05 37954406 37958729 ECH
Gma05g01618 05 37954406 37958729 Gma08g01105 08 9382362 9385912 GST
Gma05g01618 05 37954406 37958729 Gma13g01988 13 35165009 35167514 PCT
Gma13g01988 13 35165009 35167514 Gma05g01618 05 37954406 37958729 PCT