Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01615 ATGAGAATCAACTCAGAGCCAAAACCTGGCACACTGAAGCGGAATTCAACTCCATCTGATTATACTTCACCCCATTATGCTAATATAAATAGAGGCAGGTTTTATGGAGGGGATGATGATGAGGCTTTCTGGAGACTCTCATTTGGTGAAGAGAGTGGTAACGAGCATAGGAAAAGTGAAGATATTCTGAAACCAGTAAAGTACAATTTGGATGCTGAACATGCCATTCCATCCTCAAGTTTCCCCACTGGATTGAATAATGCTAAAAGGCAAGGTAGTAGAAAAGAAGGCACTCAGAAGATGAAGCAGAAGGACACTACTGGACTGAGAGAAGAAACAAAATTGCTGAATGAAGCATCTAAGAGTGTAAAGGAACTTGAATCCTTAAGGAGGAGATATGAGAGGAAAGCACAAAGAGTTTTGCAAGAGCAGCTCTTGAAATTGGAGAAGGCAGAAGAGGAAGCTGAGTTTGCATCAAGTCCATTCTTAGGAAATGATGTGCTGCAATTTGAGTCACCAAGAACAATTCGCACACCAAGAAAGCATTTTTTTGTAGATTCAAAGAGTTCCGGCCTTGGAATTCTCAGAGAATCTCGTGTGTGTGGTCCTCAATTGGGTTCTGAGTGGCATAGTTTGAATCAAACTGGGGGGTTGAAATTGAAACCAAAGGGTAACCAACAAAGGCAATCTCTTCATGTGAGCAGAGAAAATCAGAAGAGGAAACCAAAGCAGAACTCCAAGGTTAGAGTATATTCTCCAAGGATGGGTTCCAAGGTCGAAGTCCGCAAAATAAAGGCCATGGAAGAGAAGAAGAAAGCAAAACTGAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCTGTGGTGAAATGTTCTTTGGATCCACGGAAAGATTTCAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGCGAGCCAGAAGAAATGGAAGATCTGTTAGCGTGCTATCTGACTTTGAATTCTAATGAGTACCATGATCTCATCATCCAAGTGTTCAAGCAAGTATGGTTGTGTATGAGCCAAGCCAGTTCGGATATTCAATCAGACAAGCAATGTTGCCGTTGTGATTAA 1122 0.4127 MRINSEPKPGTLKRNSTPSDYTSPHYANINRGRFYGGDDDEAFWRLSFGEESGNEHRKSEDILKPVKYNLDAEHAIPSSSFPTGLNNAKRQGSRKEGTQKMKQKDTTGLREETKLLNEASKSVKELESLRRRYERKAQRVLQEQLLKLEKAEEEAEFASSPFLGNDVLQFESPRTIRTPRKHFFVDSKSSGLGILRESRVCGPQLGSEWHSLNQTGGLKLKPKGNQQRQSLHVSRENQKRKPKQNSKVRVYSPRMGSKVEVRKIKAMEEKKKAKLKMKKEEEIVEETEEGLDSFAVVKCSLDPRKDFRDSMIEMITEKQISEPEEMEDLLACYLTLNSNEYHDLIIQVFKQVWLCMSQASSDIQSDKQCCRCD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01615 373 MobiDBLite consensus disorder prediction 74 111 - -
Gma05g01615 373 MobiDBLite consensus disorder prediction 212 232 - -
Gma05g01615 373 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 295 356 IPR006458 -
Gma05g01615 373 Pfam Transcriptional repressor, ovate 300 356 IPR006458 -
Gma05g01615 373 PANTHER TRANSCRIPTION REPRESSOR OFP4 77 369 - -
Gma05g01615 373 ProSiteProfiles OVATE domain profile. 296 355 IPR006458 -
Gma05g01615 373 MobiDBLite consensus disorder prediction 9 26 - -
Gma05g01615 373 Coils Coil 263 290 - -
Gma05g01615 373 MobiDBLite consensus disorder prediction 93 111 - -
Gma05g01615 373 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 77 369 IPR038933 GO:0045892
Gma05g01615 373 MobiDBLite consensus disorder prediction 1 32 - -
Gma05g01615 373 Coils Coil 109 154 - -
Gma05g01615 373 MobiDBLite consensus disorder prediction 212 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01615 Gma-Chr5 37923906 37925027 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma05g01615 Ovate 1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01615 - - gmx:106798868 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01615 05 37923906 37925027 Gma05g01615 05 37923906 37925027 ECH
Gma05g01615 05 37923906 37925027 Gma08g01102 08 9356527 9357768 GST
Gma05g01615 05 37923906 37925027 Gma15g00814 15 6708982 6711202 PCT
Gma05g01615 05 37923906 37925027 Gma13g01996 13 35231669 35232913 PCT
Gma15g00814 15 6708982 6711202 Gma05g01615 05 37923906 37925027 PCT
Gma13g01996 13 35231669 35232913 Gma05g01615 05 37923906 37925027 PCT