Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01603 ATGATGAATCACCTGTTCATCCTAGGATTCTCAAGCCATGGTCATCACCATCGCCACCTTCTAGGTGGGATCCAGGGCTCAATATATAATATCACACTCAACACAGTTACCAGCTCCAAATCTCAACAAATGGATAGCAAGTTCAGAAAAAAGAACCGCAACGTTAACTCATATACCAGTGAACAAGATCAAGACACTGATATAGCTCAAGAAAACCTTGCCGAGTCCCCTCCTTCTTCCACTGTGTTCAACATCGATGGCTTAGTCCCCTCCCCCACTTCCTCATCAAAGAGAAGCAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATGAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCACCCTCGGATTCATGGGCATGGAGAAAGTACGGCCAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGTCCGGCACGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACGATGCTAGTCGTCACTTACTCCTCCGACCACAACCATCCCTGGCCACCTTCTAGAAACCACGCCAGGCCCACCAAAAAACCTGAACCGGTTCCGGACCCGGTCGAACCGGAGGAGAAGTTCGCGGACGAGTCCATGATAACAACCGCGGAAGAATTGGGGTGGCTGGGGGAGATGGAAGCGACGTCGTCCACGGTTCTCGAAAGCCCGTTTATGGCTACGACGTACCATGCTGACGTGGCGCTGATTCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGACCTCGGAGAGCTGCCGGAGTGCTCGGTAGTGTTCCGGCAGGGGCTGCTGGCGGAGCGGCGGCGGTACACGGCGCCGTGGTGTGGGACCACAAGTTGA 900 0.5433 MMNHLFILGFSSHGHHHRHLLGGIQGSIYNITLNTVTSSKSQQMDSKFRKKNRNVNSYTSEQDQDTDIAQENLAESPPSSTVFNIDGLVPSPTSSSKRSRRAIQKRVVQIPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPPSRNHARPTKKPEPVPDPVEPEEKFADESMITTAEELGWLGEMEATSSTVLESPFMATTYHADVALIPMREEDESLFADLGELPECSVVFRQGLLAERRRYTAPWCGTTS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01603 299 MobiDBLite consensus disorder prediction 195 210 - -
Gma05g01603 299 MobiDBLite consensus disorder prediction 57 98 - -
Gma05g01603 299 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01603 299 ProSiteProfiles WRKY domain profile. 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01603 299 Gene3D WRKY domain 117 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01603 299 SUPERFAMILY WRKY DNA-binding domain 126 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01603 299 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 45 283 IPR044810 GO:0003700
Gma05g01603 299 MobiDBLite consensus disorder prediction 39 103 - -
Gma05g01603 299 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01603 299 MobiDBLite consensus disorder prediction 182 210 - -
Gma05g01603 299 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 45 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01603 Gma-Chr5 37839368 37842373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01603 64 281 WRKY Transcription Factor Family AT1G29280 56.904 2.55e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g01603 WRKY 7.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01603 - - gmx:100793777 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01603 05 37839368 37842373 Gma05g01603 05 37839368 37842373 ECH
Gma05g01603 05 37839368 37842373 Gma08g01088 08 9264190 9265955 GST