Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01598 ATGAAGAATTGTGATGAATGGAAACCTTTCCTAGTAATGATAGCAATAGATTTTTCTTTAACCATGGTGAACATTCTGCTTAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTGTCAGTTGCTACTATATTTTTGGCCCCCATCGGCTACTTTAAGGAGAGAAATGGAAGACCACGGCTCACATTGCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTCTGGGGATCCAATACACCTCAGCTACCTTTGCTTGTGCCTTTGTTAATATGGTCCCGGTGATCACATTCATTATGGCATTACCATTTGGATTAGAAACTGTGAACATTAAATGCAAAGGTGGGAAAGCGAAGATTCTTGGTACATTTGTGTGCATAGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAGGCCTTGTTTGATGGCTCTCACCATCAATCTGCAGTAGCCATGAGATCTGCAATGGACCAAGCTTCTTCTACTACTAGAACAACACAGAAATGGACCATTGGTGTAATAGCTTTGATTATGGGAACCCTTTTTTGGTCTTTTTGGTTTATTTTACAGTCAAAGATAGGGAAGAGATATCCTTGCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTCTCCACTGGCAGCAGCAACTTGTCCTCGTGGGTTCTCAAGGATAAGATACAAATAATCACCGTTCTTTATTCAgggatagttgggtcaagtgtgtgctatgtgggcatgtcatggtgcgtaaagaagaggggtccggtctttaccgctgcattcagccctcttgttcagataatgtccggcatgattgatatccccttcttgcacgagcagcttcatcttggaagTGTGGTGGGATCCATGTTGGTGATGATCGGGTTGTACATTCTTCTCTGGGGCAAAAGCAAAGATATGATGCAGAATAATGGCGCTACTAAGTTCGCTCAAGAAGTTGAAGAAACCAAAGAACAAGAGCCACAAGTATAA 1074 0.351 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVATIFLAPIGYFKERNGRPRLTLQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCKGGKAKILGTFVCIGGALLLTLYKGKALFDGSHHQSAVAMRSAMDQASSTTRTTQKWTIGVIALIMGTLFWSFWFILQSKIGKRYPCQYSSTAIMTFFGAMQAAILGFSTGSSNLSSWVLKDKIQIITVLYSGIVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPFLHEQLHLGSVVGSMLVMIGLYILLWGKSKDMMQNNGATKFAQEVEETKEQEPQV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01598 357 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
Gma05g01598 357 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Gma05g01598 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Gma05g01598 357 PANTHER WAT1-RELATED PROTEIN 9 353 IPR030184 GO:0016021|GO:0022857
Gma05g01598 357 PANTHER WAT1-RELATED PROTEIN 9 353 - -
Gma05g01598 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01598 Gma-Chr5 37763651 37766144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01598 7 261 Nodulin-like Gene Family AT3G30340 50.980 2.73e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01598 - - gmx:100791663 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01598 05 37763651 37766144 Gma05g01598 05 37763651 37766144 ECH
Gma05g01598 05 37763651 37766144 Gma08g01083 08 9205320 9207879 GST
Gma05g01598 05 37763651 37766144 Gma13g02007 13 35343634 35357223 PCT
Gma13g02007 13 35343634 35357223 Gma05g01598 05 37763651 37766144 PCT