Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01594 ATGAAGCCCCTTTTTTGCTTATTCTTGATTCTTGTGTCGCTATTTTCTCTGGTGGAATCTTCATGCAACAACAACAGTGAAGAGCACGACTTGTTGTCAAAGGCTTTCAAATCAGTCTCTGGCTTCAACGCTTCCTCCTCCTCGTTCCAAACCAACAACTGTTTCCAAACTCACATCATCACCAGAATAGTGCTTCCATCCCAAAACCTCAGTGGAACAATCTCATGGGGTTACCTGAGGAACATGTCCAAGTTGCAGGTTATCGATCTCTCTGGCAATGCCTTACAAGGTCACGTGCCATGCTGGTTTTGGTCGAGTTCATCCTTATTGGAAATAAACCTCTCTAGAAACAGGTTCGGAGGGAGCATCCTTAAACCCACAGCAGAAAACACCTCGTTTTCGTTTTCATCCATTAAAACACTCAACCTCTCCCACAACAGGTTTACTAATTCAATCCAACTTTCTGTTTTCCGAAACCTTAAGATCCTCGACCTTTCCCACAACAACCTGGTCACACTTCCTTCCGGGTTTCAAAACCTCACCAAACTACAACACCTTGACCTCTCGAGCTGCAATCTTCAAACCAACATAAAAGCCATTTCCTCTCTTGACTCCCTTAACCACTTGGACTTATCAAACAACAACTTCACCGGTAATTTCCCTTCTGATTTCCCTCCACTCACCACCCTCAAATTCCTCAACATCTCGTTCAACAACTTCACCTCATCAATTAGCGTAAACAGGCTCACTAGATTCGGTAAATCGGCTTTCGTCCACGCTGGCAGCAACTTCACCTACGACAGTACGAAAAACTCAACACAAGAAGAAGCCATCACTCACAAGCGAAAGTTCAAAACGCTGATTGCTGCAGCGTCATCAGCAATTGTCCTAATTCTCTTGTCCATATGGGCACTCCGCATTGTGATTCAGAAGAGGAAGCAGAGCGCCAAGAGGAAAAAGTGGGCGATCTCGATGCCGGTCCCACAAGGGATGACGATGACGATGATGATGAAATCAGGGCCGTTCGCGTTCGAGACCGAATCAGGGTCAACGTGGGTGGCTGACCTGAAGGAACCGTCTTCGGCGCCGGTAGTGATGTTCGAGAAGCCGTTGATTAATCTGAGCTTCAAGGATCTCATTGTTGCCACGTCACACTTCGGGAAGGACTCGCTGCTGGCGGAGGGAAGGTGTGGGCCCGTGTACAGAGCCGTGCTGCCCGGGGAGCTCCACGTGGCAATCAAGGTCCTGGAACACGCCAGAGACGTTGATCATGATGACTCCGTGGCCACCTTTGTTGACCTCGCAAGGCTCAAGCACCCCAACTTGCTGCCCCTCTCCGGTTACTGCATTGCAGGTAAGGAGAAACTGGTGCTGTACGAATACATGGGAAACGGAGACCTGGGAAGGTGGCTACACGAGCTTCCAACTGGAGACACCAACGTGGAGGACTGGACAGGCGACACGTGGGAGATTCAAAACGGCGTCGTCGACGATGGATCCCCAGAAAAGATGGGGTGGCTCACACGACACCGTATCGCAGTGGGCATAGCGCGTGGCCTCGCGTATCTTCACCACGCGCGTTCCAAGCCCGTGGTGCACGGCCACCTCGTCACCTCTAACATTCTCCTCGCCGACGACTTCGAGCCTCGGATCGCCGATTTCGGGTTGCGATCCGACCCGAACCCGAGTTCTGGCACTGAGGACGACGTGTACTGTTTCGGGGCGGTGCTGGTGGAGCTCCTGACGGGGAGGGAGAGCACGGCGGAGGCGGTGGCGGCGGCGCGGAAGGCGGTGAGGGAGGGGCACGGCGTTAGGGTTTTGGACGAGAGGCTCCGACTCGGGGGTGACTCGGTGGTACTGAGTCAGATGGTGGAGACTCTCCGAGTCGCGTTTTTGTGTACGGCGGAGAGCCCTTCGAAGAGGCCCACAATGCAACAGGTTTTGGGTATGCTCAAAGACATTGGACCTCATCACCACCACCAAATCAACTCGTCCTGA 1998 0.524 MKPLFCLFLILVSLFSLVESSCNNNSEEHDLLSKAFKSVSGFNASSSSFQTNNCFQTHIITRIVLPSQNLSGTISWGYLRNMSKLQVIDLSGNALQGHVPCWFWSSSSLLEINLSRNRFGGSILKPTAENTSFSFSSIKTLNLSHNRFTNSIQLSVFRNLKILDLSHNNLVTLPSGFQNLTKLQHLDLSSCNLQTNIKAISSLDSLNHLDLSNNNFTGNFPSDFPPLTTLKFLNISFNNFTSSISVNRLTRFGKSAFVHAGSNFTYDSTKNSTQEEAITHKRKFKTLIAAASSAIVLILLSIWALRIVIQKRKQSAKRKKWAISMPVPQGMTMTMMMKSGPFAFETESGSTWVADLKEPSSAPVVMFEKPLINLSFKDLIVATSHFGKDSLLAEGRCGPVYRAVLPGELHVAIKVLEHARDVDHDDSVATFVDLARLKHPNLLPLSGYCIAGKEKLVLYEYMGNGDLGRWLHELPTGDTNVEDWTGDTWEIQNGVVDDGSPEKMGWLTRHRIAVGIARGLAYLHHARSKPVVHGHLVTSNILLADDFEPRIADFGLRSDPNPSSGTEDDVYCFGAVLVELLTGRESTAEAVAAARKAVREGHGVRVLDERLRLGGDSVVLSQMVETLRVAFLCTAESPSKRPTMQQVLGMLKDIGPHHHHQINSS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01594 665 Gene3D Transferase(Phosphotransferase) domain 1 565 662 - -
Gma05g01594 665 SMART LRR_typ_2 157 179 IPR003591 -
Gma05g01594 665 SMART LRR_typ_2 203 231 IPR003591 -
Gma05g01594 665 SMART LRR_typ_2 82 105 IPR003591 -
Gma05g01594 665 Gene3D Ribonuclease Inhibitor 20 129 IPR032675 -
Gma05g01594 665 Pfam Leucine rich repeat 65 119 IPR001611 GO:0005515
Gma05g01594 665 Pfam Leucine rich repeat 137 193 IPR001611 GO:0005515
Gma05g01594 665 SUPERFAMILY L domain-like 67 249 - -
Gma05g01594 665 SUPERFAMILY Protein kinase-like (PK-like) 363 655 IPR011009 -
Gma05g01594 665 Gene3D Ribonuclease Inhibitor 130 263 IPR032675 -
Gma05g01594 665 Pfam Protein tyrosine and serine/threonine kinase 390 559 IPR001245 GO:0004672|GO:0006468
Gma05g01594 665 ProSiteProfiles Leucine-rich repeat profile. 159 181 IPR001611 GO:0005515
Gma05g01594 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 272 659 - -
Gma05g01594 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 269 - -
Gma05g01594 665 PANTHER KINASE, PUTATIVE-RELATED 4 269 - -
Gma05g01594 665 PANTHER KINASE, PUTATIVE-RELATED 272 659 - -
Gma05g01594 665 Gene3D Phosphorylase Kinase; domain 1 346 461 - -
Gma05g01594 665 Gene3D Transferase(Phosphotransferase) domain 1 462 564 - -
Gma05g01594 665 ProSiteProfiles Protein kinase domain profile. 386 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01594 Gma-Chr5 37703855 37706930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01594 59 654 Receptor kinase-like Gene Family AT5G07280 30.938 1.71e-74 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gma05g01594 PK_Tyr_Ser-Thr 3.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01594 - - gmx:100809704 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01594 05 37703855 37706930 Gma05g01594 05 37703855 37706930 ECH
Gma05g01594 05 37703855 37706930 Gma08g01077 08 9145360 9148459 GST
Gma05g01594 05 37703855 37706930 Gma15g00795 15 6538636 6541542 PCT
Gma05g01594 05 37703855 37706930 Gma13g02018 13 35446930 35449723 PCT
Gma15g00795 15 6538636 6541542 Gma05g01594 05 37703855 37706930 PCT
Gma13g02018 13 35446930 35449723 Gma05g01594 05 37703855 37706930 PCT