Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01591 ATGTCAGATGAATATGAGAGGAGTGAACATGCTGATGATGACTCTTCAATGGGATCATCCCAGAAATGCTCATCCTTTGATTTGAATGAAGAAGCTAGTAGCAAAGATAACAATGACAACGATGATAAGGGATTCGAGGAAGCAAGGGAAGAAGGTACTTCAACTAATAAAAGTAGCAGCATGACAAAGGAAGGAAGTAATGAACGGAGAGGTGGCGTGAGACAATATGTTAGATCAAAAATGCCTCGGCTTCGGTGGACACCTGAACTTCATCTATCCTTTGTGCATGCTGTTGAAAGGCTTGGAGGTCAAGAAAGAGCAACACCCAAATTGGTGCTTCAGCTAATGAATGTGAGAGGCCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTAGACGAGGCTGGGCAAGTATTAGGTCAAACATACAAATCAACCCATGAACTTGGTCGTATTTCTCATGTAGCCCATCAGTCCATGAATCCTCGTCAACATTTTAAGATGGGAAATGGAGGAATTATTCTAGCAAGTGATTACAACGACCACAGTTATTTCCATGGTCTCATGCATCCCTGCTCCCTATCACATTCACATACAAAAGCCATCGATTTAAGGCGCCAACAATGGTACTTCAATAATCATCAACCTTTTAGAAGACCAAGTTACTTTAGCAACGAAGTTGTCTCCTCAACTGCCTTACAAACGCAAGGAAGATCATTATCTTCAAACCAAATTAACCTAATGGATGCCACCAGCATTGCACCCATGAGACCAAGCCAGTTTCTTGAAGAGAAAAAGTGGCCTCCCTTAGATATTATGAACAACCATCACTGGAAGAAAAGGTTGCCTGCCAATATTACTTCTAATGCTGTGTCACAACCTGTTGTACATCAATTTGGCACCACTGCAGCATCTCTGCTTAGACCAAGTGAGTTGAACTTTGGAAACAACACAAGAATCAAGGAGCATCTATCAAACTCCGACGAGCATCGCAACTATTCCAACAGTTTCAAGCTAGAATTTGAGCCTCCATTTCGGATTAAGTCGAATCAAGAAAAATTGCAGAAAGAGAACCAATGGGCGCCTGATTTGCGACTGAGTTTAAGTCAGAGAGATGGCAACAATGATGGCAAGACTGATCATTGCAGAGAAACCCAAGAAATCAACACGAAACTTTCACTTTCATAG 1206 0.4187 MSDEYERSEHADDDSSMGSSQKCSSFDLNEEASSKDNNDNDDKGFEEAREEGTSTNKSSSMTKEGSNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQTYKSTHELGRISHVAHQSMNPRQHFKMGNGGIILASDYNDHSYFHGLMHPCSLSHSHTKAIDLRRQQWYFNNHQPFRRPSYFSNEVVSSTALQTQGRSLSSNQINLMDATSIAPMRPSQFLEEKKWPPLDIMNNHHWKKRLPANITSNAVSQPVVHQFGTTAASLLRPSELNFGNNTRIKEHLSNSDEHRNYSNSFKLEFEPPFRIKSNQEKLQKENQWAPDLRLSLSQRDGNNDGKTDHCRETQEINTKLSLS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01591 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 138 IPR017930 -
Gma05g01591 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 82 137 IPR006447 GO:0003677
Gma05g01591 401 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 401 - -
Gma05g01591 401 MobiDBLite consensus disorder prediction 32 53 - -
Gma05g01591 401 MobiDBLite consensus disorder prediction 17 31 - -
Gma05g01591 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 401 IPR044848 GO:0003700
Gma05g01591 401 MobiDBLite consensus disorder prediction 1 16 - -
Gma05g01591 401 Gene3D - 81 138 - -
Gma05g01591 401 Pfam Myb-like DNA-binding domain 84 134 IPR001005 -
Gma05g01591 401 MobiDBLite consensus disorder prediction 360 379 - -
Gma05g01591 401 SUPERFAMILY Homeodomain-like 80 136 IPR009057 -
Gma05g01591 401 MobiDBLite consensus disorder prediction 359 389 - -
Gma05g01591 401 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01591 Gma-Chr5 37684127 37689959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01591 49 141 G2-like Transcription Factor Family AT2G42660 64.516 5.26e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma05g01591 Myb_DNA-binding 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01591 - - gmx:100808625 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01591 05 37684127 37689959 Gma08g01074 08 9122640 9128747 GST
Gma05g01591 05 37684127 37689959 Gma15g00789 15 6471269 6473990 PCT
Gma05g01591 05 37684127 37689959 Gma13g02024 13 35511560 35515226 PCT
Gma15g00789 15 6471269 6473990 Gma05g01591 05 37684127 37689959 PCT
Gma13g02024 13 35511560 35515226 Gma05g01591 05 37684127 37689959 PCT