Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01590 ATGGAAAGCATATGGGGGCCATTTGGATTATGGCTCCGAATTTATGTTGGATTGATTTCTCTGTGGGGAACTCGACAGTGTTGGTCTCTGAACGATGAAGGATTAACCTTGTTGGAATTTCGGGGAAGAATAACTTCTGATCCTTTTGCTGCTCTGGCAAATTGGAATCCAAACGATTGCAACCCTTGCAAATGGCTGGGTGTACGTTGTGTTGATAGTCAAGTGCAAACGCTGGTCCTACCTGATCTATCTTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTCGTCATCTAAAATCCCTTGTACTATACAAGAACAGTTTTTCTGGTACCATTCCCAAAGAACTTGGAGGTCTAGACAAGCTGGAGTTATTGGATTTAAGGGGGAATGACTTGACTGGATGTATCCCAGCAGAAATTGTCAGGGTGTTGTTGTCAAAACATTTGTTGGTTTGTGACAATAAATTTGAAGGCAGTGATTCTCAAGAGCTCAGATTGCCCTCTCATAACAATCATTTAACTCCTTTGGCAACTTTATCTCATGGCAAGAATAGAAAGTTTGCACACCGTATGTGCCATAAAAATTTCAAGCAATGGAACATGGAAGATTCATTTGTTATTCCACTTAAGGGAGCACTCAAAAATTACCTCAAAGCTGTCATTGCTGTGGCACTGCCACTGTTCAAGCTAGGAAAGGCTACTCCTCATGCCTATGAAGAGAAATACTGTAAAAATCTGACTAattttggccatgatgagtcagagtttggccaGAATGTACCAAATATAATCAATTCAGTACGACGTAAGTTGTTTGATCAGTCCAGTAACCTTGCAGCTGCACCTTTCAGTGGTGGGCCTACTATAGAGATCAGTTCTGTTCCAATTACCCAGAGCAGTGGAGCTTTCCCAGCTGTGCCAGACACCAATAAGAAACAAAATCAGTCACCTGCACCATTGCCTTCATCTTCTAATTCTCCACCTGTGAATCAAGCAAGTCAACAAAATTCACCTAATGGTGCATCTGGAAAATTATGGAAGTATATTATTATAATCGCAGGTGTTGCTGTCTTGGTCATTGTTTTTGTGATCATGCTTTGCATTTGGCGTAAACGAGCAGCAAAAGTAATAAAGCCTTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTATAACAGGGGTCCCCAAATTGAATCAGGGAGAGCTGGAAACAGCCTGTGAAGATTTCAGCAATATTATTAATAGTTTTGATGAGTGCACTATATACAAAGGAACACTATCCAGTGGAGTCGAGATTGCTGTTGATTCAACTATTGTTACTTCTGCCCGTGATTGGTCAAAGAACATGGAGACAGCCTATCGCAAAAAGATTGCTGCTTTGTCCCGTGTTAACCATAAGAACTTTACCAACCTTATTGGGTACTGTGACGAAGAAGAACCATTCACAAGGATGATGGTGTTTGAGTATGCTCCGAATGGAAACTTATTTGAGCATCTGCATGTTAAGGAAGTTGAACCTCTTGACTGGAGCGCAAGGATGAGGGTTATTATGGGCACGGCTTATTGTCTTCAGTATATGCACCATGATCTAAATCCACCAGTAGCTCATTCCAACCTCAATTCAATTGCTATATTATTAACAGATGACTTTGCTGCTAAGATATCAGAGATCTCTTTTGGCAAGCATGCAAAAACCAACACAACTGGAGATGAATCACAGAAATCTTCTGAGTTGCCACCACAGGCTGATCCTGAAACTGATGTCTATAACTTTGGAGTATTGTTGCTTGAAATCATTTCTGGGAAACTACCTTACTCTGAAGAACAAGGCCACCTTGCCAACTGGGCTGCTGAGCACTTGAATGATAAGCGAAGCATCGGCTATCTGATCGATCCCACGCTGCAGTCCTTCAAAGAGGAAGAACTTGAGGTCATCTGTGAGGTGATCAAAGATTGTCTTCAATCTGATCCAAGGTTAAGACCTACAATGAAGGACATAACTCCCAGATTGAGGGAAGTTCTTCATATATCACCCGAGCAAGCTGTCCCAAGACTCTCTCCACTCTGGTGGGCTGAACTGGAGATCTTATCAATGGAGGCCACTTAA 2115 0.4137 MESIWGPFGLWLRIYVGLISLWGTRQCWSLNDEGLTLLEFRGRITSDPFAALANWNPNDCNPCKWLGVRCVDSQVQTLVLPDLSLEGTLAPELGKLRHLKSLVLYKNSFSGTIPKELGGLDKLELLDLRGNDLTGCIPAEIVRVLLSKHLLVCDNKFEGSDSQELRLPSHNNHLTPLATLSHGKNRKFAHRMCHKNFKQWNMEDSFVIPLKGALKNYLKAVIAVALPLFKLGKATPHAYEEKYCKNLTNFGHDESEFGQNVPNIINSVRRKLFDQSSNLAAAPFSGGPTIEISSVPITQSSGAFPAVPDTNKKQNQSPAPLPSSSNSPPVNQASQQNSPNGASGKLWKYIIIIAGVAVLVIVFVIMLCIWRKRAAKVIKPWKTGISGQLQKAFITGVPKLNQGELETACEDFSNIINSFDECTIYKGTLSSGVEIAVDSTIVTSARDWSKNMETAYRKKIAALSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGNLFEHLHVKEVEPLDWSARMRVIMGTAYCLQYMHHDLNPPVAHSNLNSIAILLTDDFAAKISEISFGKHAKTNTTGDESQKSSELPPQADPETDVYNFGVLLLEIISGKLPYSEEQGHLANWAAEHLNDKRSIGYLIDPTLQSFKEEELEVICEVIKDCLQSDPRLRPTMKDITPRLREVLHISPEQAVPRLSPLWWAELEILSMEAT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01590 704 Gene3D Ribonuclease Inhibitor 32 205 IPR032675 -
Gma05g01590 704 ProSiteProfiles Protein kinase domain profile. 394 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01590 704 PANTHER LRR RECEPTOR-LIKE KINASE 1 704 - -
Gma05g01590 704 SUPERFAMILY Protein kinase-like (PK-like) 402 672 IPR011009 -
Gma05g01590 704 MobiDBLite consensus disorder prediction 566 583 - -
Gma05g01590 704 SUPERFAMILY L domain-like 29 186 - -
Gma05g01590 704 Pfam Protein tyrosine and serine/threonine kinase 423 672 IPR001245 GO:0004672|GO:0006468
Gma05g01590 704 MobiDBLite consensus disorder prediction 304 340 - -
Gma05g01590 704 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Gma05g01590 704 Gene3D Phosphorylase Kinase; domain 1 381 492 - -
Gma05g01590 704 Gene3D Transferase(Phosphotransferase) domain 1 493 685 - -
Gma05g01590 704 PANTHER PROTEIN MALE DISCOVERER 2 1 704 - -
Gma05g01590 704 MobiDBLite consensus disorder prediction 566 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01590 Gma-Chr5 37659564 37665196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01590 29 669 Receptor kinase-like Gene Family AT1G66830 25.108 3.45e-44 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma05g01590 PK_Tyr_Ser-Thr 3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01590 - - gmx:100808098 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01590 05 37659564 37665196 Gma05g01590 05 37659564 37665196 ECH
Gma05g01590 05 37659564 37665196 Gma08g01073 08 9097156 9102450 GST