Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01589 ATGGCAGAGGTGGCGCCGCCGAAGAAGGAAAACCCGAACCTTCTCCTGGGGCGGTTCGAGCTCGGGAAGCTCCTCGGGCACGGAACCTTCGCGAAGGTCCACCACGCGCGCAACATCAAAACCGGAGAAGGAGTCGCCATCAAGATCATCAACAAGGAGAAAATCCTAAAGGGGGGTTTGGTCTCCCACATAAAGCGCGAGATCTCCATTCTCCGGCGCGTGCGCCACCCCAACATCGTGCAACTCTTCGAAGTGATGGCCACCAAGACCAAGATCTACTTCGTCATGGAGTACGTGCGTGGCGGCGAACTCTTCAACAAGGTCGCAAAGGGAAGATTAAAAGAAGAAGTTGCGAGAAATTACTTTCAGCAGTTAGTTTCCGCGGTGGAGTTTTGCCACGCGCGCGGCGTGTtccacagggacctgaagcccgagaacctgttgctggacgaggatgggaaccttaaagtctccgactttggTCTCAGTGCCGTGTCGGATCAGATAAGGCAGGACGGGCTGTTCCACACGTTTTGTGGGACACCTGCGTATGTTGCTCCTGAGGTCTTGTCGCGGAAAGGCTACGATGGTGCAAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTGTTCTGATGGCCGGCTATTTGCCCTTCAATGACCGTAACGTTATGGCTATGTATAAGAAGATTTACAAGGTCATGGAGAATCGCTGGTTCAAGAAGGGTTTCAAGCAGATTAAGTTTTATGTGGAGGATGATAGAGTTTGTAGTTTTGACGAGAAACTGTTACTTCATCATGATGATGATTTGGCAACATCGGATTCTGAGGTTGAGATTAGGAGGAAGAATAGTAATGGTTCGTTGCCGAGGCCTGCGAGTTTGAATGCGTTTGACATCATATCGTTTTCTCAGGGCTTTGATCTATCAGGGTTGTTTGAGGAAAAGGGTGATGAGGCGAGGTTTGTGTCATCTGCTCCGGTGTCGAAGATTATATCAAAATTGGAGGAGGTTGCTCAGTTGGTTAGTTTCAGTGTGAGGAAGAAAGATTGCAGGGTGAGCTTGGAGGGGTGTAGAGAAGGTGTGAAGGGGCCTTTGACTATTGCTGCTGAGGTTTTTGAGTTGACACCTTCCTTGGTGGTGGTGGAGGTCAAGAAAAAGGGAGGGGATAAGGCCGAGTATGAGAAGTTTTGTAACTCTGAGTTGAGACCCGCGTTGGAGAATTTAGGGATGGAGGAATCTGCTTCTTCTTCTTCTTCTTGTCATCAATCTACACACACTCAATCTGAATTCCAACAACATCGAACACTTTCTGACTCTGCCCTTAACAGACATTCAGATAATGAATGGTTTCTGGATCATTTGGTACTTTGTGCTGATGCAATGAAGCCCTGGTGTTGA 1401 0.459 MAEVAPPKKENPNLLLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARNYFQQLVSAVEFCHARGVFHRDLKPENLLLDEDGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFNDRNVMAMYKKIYKVMENRWFKKGFKQIKFYVEDDRVCSFDEKLLLHHDDDLATSDSEVEIRRKNSNGSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSAPVSKIISKLEEVAQLVSFSVRKKDCRVSLEGCREGVKGPLTIAAEVFELTPSLVVVEVKKKGGDKAEYEKFCNSELRPALENLGMEESASSSSSCHQSTHTQSEFQQHRTLSDSALNRHSDNEWFLDHLVLCADAMKPWC 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01589 466 Pfam Protein kinase domain 20 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01589 466 CDD CIPK_C 296 406 - -
Gma05g01589 466 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Gma05g01589 466 ProSiteProfiles Protein kinase domain profile. 19 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01589 466 SUPERFAMILY Protein kinase-like (PK-like) 15 237 IPR011009 -
Gma05g01589 466 Gene3D Kinase associated domain 1, KA1 290 410 - -
Gma05g01589 466 ProSiteProfiles NAF domain profile. 290 314 IPR018451 GO:0007165
Gma05g01589 466 Pfam NAF domain 292 348 IPR004041 GO:0007165
Gma05g01589 466 MobiDBLite consensus disorder prediction 413 435 - -
Gma05g01589 466 Gene3D Transferase(Phosphotransferase) domain 1 9 288 - -
Gma05g01589 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Gma05g01589 466 PANTHER - 13 233 - -
Gma05g01589 466 PANTHER - 233 419 - -
Gma05g01589 466 SMART serkin_6 19 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01589 466 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 13 233 - -
Gma05g01589 466 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 233 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01589 Gma-Chr5 37649223 37651887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01589 6 413 CBL-interacting serine-threonine protein kinases AT4G18700 73.214 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma05g01589 Pkinase 3.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01589 - - gmx:100807567 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01589 05 37649223 37651887 Gma08g01072 08 9089776 9091888 GST