Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01561 ATGGATTTCCAAGTCGTCGTTCTCGGCGGTGGCGTCTCCAAGAAGCTCATCCCTCTCGTTTCGCAGGAGCTTCCGAACGCGTTGCTTCCGTTGGCGAATCGCCCCGTTCTCTCCTACGTTCTCGAGTACTTGGAGCTTAGCAACCTCAAAGATCTCATTGTGGTGGTCGAAGGCGAAGAAGCGGCTCTTCATGTTGGGGCTTGGATTTCGGGGGCTTATGCTGATCGCCTCCACGTTGAGGTTGCTGCAGTTCCTGAGGATGTGGGGACAGCGGGTGCAATTCGGGCCATTTCACATCACCTAACTGCTAAAGACATTTTGGTTGTCAGTGGTGATCTTGTTACTGATGTGCCACTTGGTGCTGTTGCAGCTACTCATAGACGGCATGATGCAGTTGTCACTGCTATGCTTTGCTCTGCTCCTGTAAGTGGACCTTTGGAGTCAGTATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTGATAGGGCTGGATCCCACAAAACAGTTTTTAGTTCACATAGCAACTGGAGCAGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATGCTCCCAGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGACGCCCACTTGTATGCATTCAAAAGATCAGTTCTACAAGAAGTTCTAGATCAGAAAAGTGCATTTCATAGCTTAAAGCATGATGTACTGCCATATCTAGTCCGGAGCCAACTGAAATCAGAAGTATTATTAAATGGCATACCACAAGCAGAAGAAAACAGAACTGAAAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTCGCTAATGCATCTGAACCAACCTTTCATCTACGACATGCACTGGGTCCTTATGGTTCTACTTTTGATCGAAGAACCCACAAATGCTGTGTGTATATTGCTGGAAGCAGCAAATACTGTGCTCGCTTAAATTCTATACAAGCATACACTGACATTAACCGTGATGTGATAGGAGAGGCTAGTCGCTTATCAGGGTATTCCTTCTCTACTCTAAACAACATTATCCATCCTTCTGCAGAGCTTGGGGCAAAAACAACAGTTGGACCACATTGTATACTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGGTCTGTCATTGGCCGTCATTGTCGGATTGGTGCTAATGTTAAGGTTGTTAATTCAGTAGTTATGAATCATGTTACTATCGGAGAATCTTGTTCAATCCAAGGTTCTGTTATCTGCAGCAACGTACAGCTCCAAGAACGTGCTGTACTAAAAGATTGCCAAGTTGGAGCAGGTTTTGTGGTCACTGCTGGTAGTGAGTGCAAGGGGGAGGTCTTGGCAAAGAAATGA 1380 0.4543 MDFQVVVLGGGVSKKLIPLVSQELPNALLPLANRPVLSYVLEYLELSNLKDLIVVVEGEEAALHVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAISHHLTAKDILVVSGDLVTDVPLGAVAATHRRHDAVVTAMLCSAPVSGPLESVSSGGKDKTKKPGRYDLIGLDPTKQFLVHIATGAEVEKDLRIQKSMLPAVGQIEIRADLMDAHLYAFKRSVLQEVLDQKSAFHSLKHDVLPYLVRSQLKSEVLLNGIPQAEENRTEKVISQSNQQMLSQILANASEPTFHLRHALGPYGSTFDRRTHKCCVYIAGSSKYCARLNSIQAYTDINRDVIGEASRLSGYSFSTLNNIIHPSAELGAKTTVGPHCILGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGESCSIQGSVICSNVQLQERAVLKDCQVGAGFVVTAGSECKGEVLAKK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01561 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 345 IPR029044 -
Gma05g01561 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Gma05g01561 459 CDD LbH_eIF2B_gamma_C 370 450 - -
Gma05g01561 459 Pfam Nucleotidyl transferase 6 141 IPR005835 GO:0009058|GO:0016779
Gma05g01561 459 Gene3D Hexapeptide repeat proteins 348 456 - -
Gma05g01561 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Gma05g01561 459 CDD eIF-2B_gamma_N 3 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01561 Gma-Chr5 37424483 37428509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01561 3 450 Eukaryotic Initiation Factors Gene Family AT2G34970 22.574 3.76e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01561 K03241 - gmx:100783346 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01561 05 37424483 37428509 Gma08g01044 08 8831517 8835546 GST