Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01505 atgagatgtcgtcgtaggcctccggccagtctacgacggtctccttccaccgttttagaaacacacgattcctgcgacggggatgacgggaggcccgtagttgcaagttcaccttcgaagacattgccggcacgaggaacaacgttgaaaggtaagcttttaaggtcgggctatggcggcaccgacgtagtgtatgacaatcaatgcttgaaaggtaaggtctactatgtcgttgcaccggcaacgaccgccgttgaatggttggccaactacgtcgttgctgccGAAATATTGGATAGTTTCCAGGATACTGAATTTTGGTACGCGGAGCAAGGGACCATATCAGGGAATTCAACTCGGTCACGGGGAGGCTCATTTCGAAGGATTGTTCAGAGGAAAGATGAGAAGTGGTGGCTGCCGGTTCCTTGTGTTCACCTTGGGGGCCTTATTGATAAGTCAAGGAAGCACTTGAATGAGAAAAGAGATTGTGCTAATCAAATTCATAAAGCTGCAATGGCTATAAATAGCAGTGCTCTTGCAGAGATGGATATCCCAGAAACATATATGTCTAATCTTCCCAAGcattcagcagcagaattcagcagtcaagattcaacagattcagcagcagcagattgcagaaaagtggaaattgcagattcagcagcagcCACTGCCTCTAaatctattcttgctgttgttgctgagATAGTTCTTGTGGGTGGTGCTGAGTACTACAGAATTATTAATGGCCTGGACTTGGAAGACAAGCTTCatccgggtggtccattcgacccattgggactagcaaaggatccagaccaagctgcacttctaaaggtgaaggaaattaagaatggtagacttgctatgtttgcaatgcttggtttctacttccaagcatatgtcactggagaaggtccagttgagaacttagcaaaacatctcagtgacccTTTTGGTAACAACTTGCTCACTGTGATTGCTGGCTCCACTGAGAGGGCTCCAACTCTGTAA 1017 0.1898 MRCRRRPPASLRRSPSTVLETHDSCDGDDGRPVVASSPSKTLPARGTTLKGKLLRSGYGGTDVVYDNQCLKGKVYYVVAPATTAVEWLANYVVAAEILDSFQDTEFWYAEQGTISGNSTRSRGGSFRRIVQRKDEKWWLPVPCVHLGGLIDKSRKHLNEKRDCANQIHKAAMAINSSALAEMDIPETYMSNLPKHSAAEFSSQDSTDSAAADCRKVEIADSAAATASKSILAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSTERAPTL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01505 338 Pfam Chlorophyll A-B binding protein 216 301 IPR022796 -
Gma05g01505 338 MobiDBLite consensus disorder prediction 1 41 - -
Gma05g01505 338 Gene3D Chlorophyll a/b binding protein domain 184 338 - -
Gma05g01505 338 ProSiteProfiles PRONE domain profile. 1 338 IPR005512 GO:0005085
Gma05g01505 338 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 228 338 IPR001344 GO:0009765|GO:0016020
Gma05g01505 338 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 95 198 IPR005512 GO:0005085
Gma05g01505 338 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 228 338 - -
Gma05g01505 338 SUPERFAMILY Chlorophyll a-b binding protein 227 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01505 Gma-Chr5 36928718 36932505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01505 241 338 Chloroplast and Mitochondria Gene Families AT4G10340 91.837 1.81e-59 191