Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01500 ATGTTGAAATCTTTGCGGAAAAGCCTAAGCCTTCAACAGAAGTGTCTCCAGCACAAGAACCAAGTTGATAACGCTGAGTCAGTGCATGGTGCAAACCTGGCAAATTGCATTTTTTGCGTGGAGGAAACTAAACAATGCAAGTGTGACCACAACAACATTGAGGATACAAAGAGTGCAGAAGGGGGCACCAATTTAGATGCAGAGCATGACTCCGAAGCCAATTGTTCTTTCACTCATGCTGTCATCAATATGGTCGGGATGCTCATAGGTAAAGTTTGCACTATTGTTTACCAAGGAGGGTGGACATCTGCATTTTTGCTTATAGGACTCGGTGTGATATGTGCATATAGTTCTCATTTACTTGGGAAATGCCTAGAAAAGAACACCAAGTTAAGAAGTTACGTGGACATTGGGGGTCATGCATTTGGTGCAAAAGGAAGAATCATGGCTACAACTTTCATCTACATGGAGATCTTCATGGCCCTTGTTTCCTACACCATCTCATTGCATGACAACTTGAATTCAATCTTCTCAGGGATGCATCTGAAGCTCCAATTGGCAAAACTATCTACATTACAGCTCCTGACCATTGGTGCAGTGTTGATTGCTCTGCCTAGTTTGTGGCTCAGAGATCTCTCTTCCATATCTTTCCTTTTAACTGGTGGCATTCTCATGTCCCTTGTCATTTTTGTGTCAATAGCATCCACTCCAATTTTTGGAGGTGTTCAAATTAATCATAAGATACCCCTCCTCCACCTCCACAGCATTCCTTCAATTTCTGGCCTTTACATCTTCAGCTATGGAGGACACATTGTTTTCCCTAATTTGTATAAAGCCATGAAAGACCCCTCAAAGTTTACCAAGGTATCTATAGTGAGCTTCACATTAGTTACATTACTTTACACGACCTTGGGTTTCATGGGTGGCAAAATGTTTGGGCCGGATGTCAATTCTCAGGTAACCCTCAGCATGCCACCAAAGCTTTTTGTAACAAAGATTGCTCTGTGGGCAACCGTGGTGACGCCTATGACCAAATATGCCCTTGAATTTGCACCTTTCGCTATTCAGTTAGAGAAAAGGCTTCCCAAGTTTAACAGTGGCAGGACAAAAATGATAATTAGGAGTAGTGTGGGTTCATTTTTGCTTTTGGTTATACTAGCCCTTGCTCTTTCAGTGCCATATTTTGAACATGTACTCTGCCTCACTGGTTCTCTAGTTAGTGTTGCAATTTGTTTGATTTTCCCATGTGCTTTCTACATAAAAATTTGTTGGGGTCAAATATCAAAGCCTCTCTTTGTCCTAAACCTCTCTATCATCACATGTGGGTTTCTTCTTGGGGTCATGGGCACCATTTCCTCCTCAAACTTGCTAGTGAAACATTTTCTACAAGCTCAATCTGCTTGA 1404 0.4188 MLKSLRKSLSLQQKCLQHKNQVDNAESVHGANLANCIFCVEETKQCKCDHNNIEDTKSAEGGTNLDAEHDSEANCSFTHAVINMVGMLIGKVCTIVYQGGWTSAFLLIGLGVICAYSSHLLGKCLEKNTKLRSYVDIGGHAFGAKGRIMATTFIYMEIFMALVSYTISLHDNLNSIFSGMHLKLQLAKLSTLQLLTIGAVLIALPSLWLRDLSSISFLLTGGILMSLVIFVSIASTPIFGGVQINHKIPLLHLHSIPSISGLYIFSYGGHIVFPNLYKAMKDPSKFTKVSIVSFTLVTLLYTTLGFMGGKMFGPDVNSQVTLSMPPKLFVTKIALWATVVTPMTKYALEFAPFAIQLEKRLPKFNSGRTKMIIRSSVGSFLLLVILALALSVPYFEHVLCLTGSLVSVAICLIFPCAFYIKICWGQISKPLFVLNLSIITCGFLLGVMGTISSSNLLVKHFLQAQSA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01500 467 Pfam Transmembrane amino acid transporter protein 96 451 IPR013057 -
Gma05g01500 467 PANTHER AMINO ACID TRANSPORTER AVT1H 21 463 - -
Gma05g01500 467 PANTHER OS05G0424000 PROTEIN-RELATED 21 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01500 Gma-Chr5 36899172 36901734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01500 36 465 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.666 1.42e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01500 - - gmx:100787423 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01500 05 36899172 36901734 Gma05g01500 05 36899172 36901734 ECH