Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01499 ATGGAGATCGTTCGTCCTCAGAATCGCAGAAACTTGTTGTCCTCCTCCAACGAAGCCGTTTCTGCTCCCACCATTCCCCTCTATCGCTCTGCTCCCCCACTTGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCACGGGGGAAAAAAGCGGAAGAAATGGAGAATTTGGTAAAGGACCTGTGGAAAGTGAATATGAGACATCAAGAGGCAACTCAGGTTCTGAACAAGGATATTATATCTCATTTTGTTCTACGTCTGGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCATGGAAACTGCACTCTTTCGCTACCGTTTTCGTCTTCTGAATGCTGAAGCTCAGAGGACAGTCATGGAAGAATTTGACCTTCCTTACAGGGCCGTTAGCAATGTGGAATTTGAGAGCATAAAAGAGAAATTGGGACAAGTTGCACGTTCTATGGGTCAGCCTTCACCTACTGCTGATGCTATCTTCTACAAGGTACCGTTTGAAGAAGTTCCAGAGCTTGTTGCTGGACGGAGAGTGTTTATAAATCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACAATTCCGCAGTCAGCTGTCAAAGGCACTTATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAGCAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTCCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAGAGAATATGCTGATATATCATTAAAGGACATAGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTGAAGGGTGTTGGCTTAAATCTGGATGATGCACTTGCATTTTGGAGGTCAGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTTGAGAAACAATATGCATACAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGATTATTTCATCAACTCCTGGAGCTGGGGATCATCATGGTTGCCCCTATCGACATTTCAGTGAAGAGAACCTAAGAGCTGCTCTTAGCGGAATGGGGGTAAACAGTCAAGCAATGGAAGATGTGATGGACAAAGTGAGAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGCCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGTCAAAAGATATTAAAGCCAAAGAAGGATTCTTCAGCCTAA 1374 0.4323 MEIVRPQNRRNLLSSSNEAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMSRGKKAEEMENLVKDLWKVNMRHQEATQVLNKDIISHFVLRLVYCRTEDLRKWFLSMETALFRYRFRLLNAEAQRTVMEEFDLPYRAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKVPFEEVPELVAGRRVFINQGYAYVAMNQIVSLVATQFRSQLSKALILTNRKWTSSIREQEKHRLTPIVEALSSSYLGPDYSQSREYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRHFSEENLRAALSGMGVNSQAMEDVMDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQKILKPKKDSSA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01499 457 Gene3D - 3 250 - -
Gma05g01499 457 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Gma05g01499 457 PANTHER DNA PRIMASE LARGE SUBUNIT 1 453 IPR007238 GO:0006269
Gma05g01499 457 PIRSF DNA_primase_large 2 457 IPR016558 -
Gma05g01499 457 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
Gma05g01499 457 PANTHER DNA PRIMASE LARGE SUBUNIT 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01499 Gma-Chr5 36886052 36894049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01499 1 452 Core DNA Replication Machinery Family AT1G67320 67.828 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01499 K02685 - gmx:100806321 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01499 05 36886052 36894049 Gma08g00981 08 8314034 8320600 GST