Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01493 ATGACACCTGGTTACGAATACGATATTAATGATCTGCATCAAGAGGCTCAAGCAAGATGGTTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTTCCAGTTCACCCAAGAGCCCCCACAACAGCCAACCAGTGGATCTCTGTTTCTGTTTAACAAAAGAGTCCTGCGTTTCTTCCGTAAAGATGGTCATAACTGGCGTAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAAAGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACACGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATATGATCATATTGTTCTTGTGCATTATAGGAACACAAGTGAGGGAAAGCTCAGTTCTGGAGCTGGGGCACAATTGTCACCAAGTTCCTCTTCTGTGTATACTCAGAGTCCTAGCCCATATTCTACTCAGAATCCAGGGTCAACATCCATACTTGGCGATTCATATGAACCTAATCAGAGTTTCTCCAGTCCAGGGTCTACAGAAGTTACGTCTGATATGTTCGTACTGAACAATAAAATGGGTCACATGGATGGGACAGATACAGAATCAGGAACCTCGCCTGAACTCGAGGTTACTCAAGCTTTGCGCCGATTGGAGGTGCAGTTAAGTTTGAATGAGGACAACTTTGAAGATATTGTTTCCTTCGGAAGTAAGCACGAAACTACACATGATTCAAACCCTCAGCACGACCAAAGGGTGATCAGCAATCAAGAGCAATCTGCTGCTTTCTCTGGACCTGATGATCAAGGGCTATTTTATGATGGATATAATGGAAGGCAAGgtgatggtggtgaattttatcatgaattaatagaccatggttaccctgatggaaatgaaaaggctttatggacagaggtgctggaatcatgtaagtcctcatctgcagtcaagttaccacagaaaaatgtatacatgccagttgaaaatctggaaaattcagtatcttctgcaagaagggtaccagtttccaaccaggaaaacagtcactggctcaacttcaacagtaataattctgaaaactctgttttctcacaacctcaaggtgttgatgaagtcaaatttcctgtctattcttctatggtggaaacacaagtaattaattctgactactatgaaacattgtttgaccaaagccaaattggagcacctccagatgcaaattcaagcttgactgttgcacaaaaacagaaatttacaattaagacaatctccccagaatggggttatgccactgagactaccaaggtcattgttgttgggtctcttctctgtcatccctcggattctgcatgggcttgtatgtttggtgatgttgaagttcctgttgagataattcaggatggtgtaatctcttgtgaagctccatCTCACCTTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGTGAGGTCAGAGAGTTTGAATATCGTGATAAGACCAATAGTTGCACTCAATGTACTCAATCAGAAACAGAAGCCACTAGAAGTCCAGAAGAGCTGTTATTACTTGTTAGATTAGAGCAAATGCTTCTTTCTGCATCAACAATAAAGAATGACAACATAGAATCTGGAATTCCTCTCATAAAACAGAAAGCTGATGATGACTCGTGGAGCCATATTATAGAGGCTCTTCTAGTTGGCAGTGGAACGTCGACTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTTCAACAGTGGCTTTCTTGCAGATCTCAGGAAAAAGATGAAGAGACAGGCTGCTCTTTGTCCAAGAAAGAGCAAGGGATTATTCACATGGTTGCTGGGTTAGGTTTTGAGTGGGCCTTGAACCCTATTCTCACTTGTGGAGTCAATATAAATTTCCGTGACATCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAAATGCACAAGATCCAACCGGTAAAACTGCTGCATCTATTGCAGCCGGCAATGGGCACAAGGGACTGGCAGGGTATCTTTCAGAGATAGCTGTAACAAGCCATCTGTCATCTCTTACACTGGAAGAGAGTGAATTATCTAAAAGTTCTGCTGAGCTTCAGGCAGATATGACTGTTAACAGTGTCTCCAAGGAAAATCTTACTGCCAGTGAGGATCAGGCATCACTCAAAGATACCTTGGCTGCTATCAGAAATGTAACTCAGGCAGCTGCGCGGATACAATCTGCTTTTCGTTCACATTCTTTTAGAAAACGAAGAGCAAGAGAAGTAGCTGCTAGTGCAGGTGGCATTGGTACCATTTCAGAGATTTCTGCTATGTCAAAACTTGCCTTTCGGAACTCACGTGAATATAATTCAGCTGCTTCAGCTGCTTTATCGATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTAGCGTTGCGCAAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGCTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCAGTTGGAATCTTGGACAAGGTTGTCTTACGATGGAGGAGAAAAGGAGCTGGTTTACGAGGTTTCCGACAAGAGATGGACATCAACGAAAATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTTGATGTAGAAATTGAAGAGGCTGTTTCAAGGGTGCTGTCCATGGTCGACTCACCAGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAATATCGTCAAGCTAAGGCTGAACTTGCGGGTACGAGTGACGAGGCATCATTATCAACTTCTGTAGGAGATGACTTATTTATTGATGATTTTTATCCATTTCCCTAG 2952 0.3489 MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYDHIVLVHYRNTSEGKLSSGAGAQLSPSSSSVYTQSPSPYSTQNPGSTSILGDSYEPNQSFSSPGSTEVTSDMFVLNNKMGHMDGTDTESGTSPELEVTQALRRLEVQLSLNEDNFEDIVSFGSKHETTHDSNPQHDQRVISNQEQSAAFSGPDDQGLFYDGYNGRQGDGGEFYHELIDHGYPDGNEKALWTEVLESCKSSSAVKLPQKNVYMPVENLENSVSSARRVPVSNQENSHWLNFNSNNSENSVFSQPQGVDEVKFPVYSSMVETQVINSDYYETLFDQSQIGAPPDANSSLTVAQKQKFTIKTISPEWGYATETTKVIVVGSLLCHPSDSAWACMFGDVEVPVEIIQDGVISCEAPSHLPGKVTLCITSGNRESCSEVREFEYRDKTNSCTQCTQSETEATRSPEELLLLVRLEQMLLSASTIKNDNIESGIPLIKQKADDDSWSHIIEALLVGSGTSTGTVDWLLEELLKDKLQQWLSCRSQEKDEETGCSLSKKEQGIIHMVAGLGFEWALNPILTCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPNAQDPTGKTAASIAAGNGHKGLAGYLSEIAVTSHLSSLTLEESELSKSSAELQADMTVNSVSKENLTASEDQASLKDTLAAIRNVTQAAARIQSAFRSHSFRKRRAREVAASAGGIGTISEISAMSKLAFRNSREYNSAASAALSIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMDINENENEDEDILKVFRKQKVDVEIEEAVSRVLSMVDSPDAREQYHRMLEKYRQAKAELAGTSDEASLSTSVGDDLFIDDFYPFP 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01493 983 ProSiteProfiles Ankyrin repeat region circular profile. 653 679 - -
Gma05g01493 983 SUPERFAMILY Ankyrin repeat 622 714 IPR036770 -
Gma05g01493 983 Gene3D Immunoglobulins 418 513 IPR013783 -
Gma05g01493 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 821 871 IPR027417 -
Gma05g01493 983 SMART CG_1_2 12 130 IPR005559 GO:0003677
Gma05g01493 983 SMART iq_5 847 869 IPR000048 GO:0005515
Gma05g01493 983 SMART iq_5 824 846 IPR000048 GO:0005515
Gma05g01493 983 SMART iq_5 770 792 IPR000048 GO:0005515
Gma05g01493 983 ProSiteProfiles Ankyrin repeat profile. 653 685 IPR002110 GO:0005515
Gma05g01493 983 ProSiteProfiles IQ motif profile. 772 800 IPR000048 GO:0005515
Gma05g01493 983 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Gma05g01493 983 CDD IPT 424 509 - -
Gma05g01493 983 Gene3D - 531 718 IPR036770 -
Gma05g01493 983 MobiDBLite consensus disorder prediction 252 268 - -
Gma05g01493 983 Pfam IQ calmodulin-binding motif 827 845 IPR000048 GO:0005515
Gma05g01493 983 Pfam IQ calmodulin-binding motif 849 869 IPR000048 GO:0005515
Gma05g01493 983 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Gma05g01493 983 Gene3D - 825 873 - -
Gma05g01493 983 MobiDBLite consensus disorder prediction 133 186 - -
Gma05g01493 983 SMART ANK_2a 653 682 IPR002110 GO:0005515
Gma05g01493 983 SMART ANK_2a 692 721 IPR002110 GO:0005515
Gma05g01493 983 SUPERFAMILY E set domains 424 508 IPR014756 -
Gma05g01493 983 Coils Coil 943 963 - -
Gma05g01493 983 MobiDBLite consensus disorder prediction 242 273 - -
Gma05g01493 983 Pfam Ankyrin repeats (3 copies) 635 713 IPR002110 GO:0005515
Gma05g01493 983 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 969 - -
Gma05g01493 983 ProSiteProfiles IQ motif profile. 848 873 IPR000048 GO:0005515
Gma05g01493 983 Pfam IPT/TIG domain 424 507 IPR002909 -
Gma05g01493 983 ProSiteProfiles IQ motif profile. 825 854 IPR000048 GO:0005515
Gma05g01493 983 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 5 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01493 Gma-Chr5 36807577 36818222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01493 5 973 CAMTA Transcription Factor Family AT1G67310 53.254 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gma05g01493 CG-1 1.6e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01493 K21596 - gmx:100786880 1885.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01493 05 36807577 36818222 Gma08g00978 08 8253771 8265662 GST
Gma18g00049 18 411440 419885 Gma05g01493 05 36807577 36818222 PCT
Gma11g02531 11 40418547 40428911 Gma05g01493 05 36807577 36818222 PCT
Gma05g01493 05 36807577 36818222 Gma18g00049 18 411440 419885 PCT
Gma05g01493 05 36807577 36818222 Gma11g02531 11 40418547 40428911 PCT