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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma05g01480
ATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACCAAGTCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAGAACACTAGGGAAACTGCCTTTGCAATCAGGAAGTTGCCCTTGGTTAAAGCTAAAAGGTACTTGGAAGATGTTCTTGCGCACAAGCAGGCCATTCCGTTCAGACGTTTCTGTCGTGGTGTTGGAAGGACAGCTCAAGCAAAGAATAGACACTCTAATGGCCAAGGAAGGTGGCCTGTCAAGTCAGCAAAATTCATCCTTGATTTGCTCAAAAATGCTGAGAGCAATGCTGAAGTGAAAGGTTTGGATGTTGATGCGCTTTACATTTCTCATATCCAAGTCAATCAAGCACAGAAGCAAAGACGCCGAACATACCGAGCCCATGGAAGAATCAATCCTTATATGTCATCTCCGTGCCACATAGAGTTGATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGCCCGAGACTAAGTTAGCAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGCACTTCATCTTAG
546
0.4487
MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETKLATSKKSQALRSGTSS
181
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma05g01480
181
Gene3D
Ribosomal protein L22/L17
1
180
IPR036394
GO:0003735|GO:0005840|GO:0006412
Gma05g01480
181
TIGRFAM
uL22_arch_euk: ribosomal protein uL22
4
154
IPR005721
GO:0003735|GO:0006412|GO:0015934
Gma05g01480
181
Pfam
Ribosomal protein L22p/L17e
17
152
IPR001063
GO:0003735|GO:0005840|GO:0006412
Gma05g01480
181
PANTHER
60S RIBOSOMAL PROTEIN L17-2-LIKE
1
181
-
-
Gma05g01480
181
ProSitePatterns
Ribosomal protein L22 signature.
127
151
IPR018260
GO:0003735|GO:0005840|GO:0006412
Gma05g01480
181
MobiDBLite
consensus disorder prediction
156
181
-
-
Gma05g01480
181
Hamap
50S ribosomal protein L22 [rplV].
2
154
IPR005721
GO:0003735|GO:0006412|GO:0015934
Gma05g01480
181
SUPERFAMILY
Ribosomal protein L22
1
154
IPR036394
GO:0003735|GO:0005840|GO:0006412
Gma05g01480
181
CDD
Ribosomal_L22
15
151
IPR001063
GO:0003735|GO:0005840|GO:0006412
Gma05g01480
181
PANTHER
60S RIBOSOMAL PROTEIN L17
1
181
IPR005721
GO:0003735|GO:0006412|GO:0015934
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma05g01480
Gma-Chr5
36607389
36610019
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma05g01480
1
174
Cytoplasmic Ribosomal Protein Gene Family
AT1G27400
89.655
1.94e-117
328
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma05g01480
K02880
-
gmx:100499784
357.066
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma05g01480
05
36607389
36610019
Gma08g00963
08
8117705
8120931
GST
Gma11g02511
11
40264995
40266574
Gma05g01480
05
36607389
36610019
PCT
Gma05g01480
05
36607389
36610019
Gma11g02511
11
40264995
40266574
PCT
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