Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01479 ATGGATTGGCAAGGGCAAAAGCTGGCGGAGCAACTGATGCAGATAATGCTGCTTGCATTTGCTGTGATTGCATTTGTAGGTGGATATGTCATGGCTTCTTTCCAAATGATGATTCTCATATATGCTGGGGGTGTGGTTTTCACCACCTTGCTCACTGTCCCCAATTGGCCCCTTTTCAATCGCCACCCTCTTACGTGGTTGGATCCAAGTGAGGTGGAAAAGCATCCCAAGCCACTACCATCTGCCAATGTAACTCAAAAGAAGAAACCTGTTAAGAAGTAG 282 0.4645 MDWQGQKLAEQLMQIMLLAFAVIAFVGGYVMASFQMMILIYAGGVVFTTLLTVPNWPLFNRHPLTWLDPSEVEKHPKPLPSANVTQKKKPVKK 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01479 93 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016021
Gma05g01479 93 MobiDBLite consensus disorder prediction 70 93 - -
Gma05g01479 93 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 89 IPR009542 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01479 Gma-Chr5 36601262 36602309 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01479 K12946 - gmx:100797100 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00070 18 581012 585034 Gma05g01479 05 36601262 36602309 PCT
Gma11g02510 11 40262048 40264697 Gma05g01479 05 36601262 36602309 PCT
Gma05g01479 05 36601262 36602309 Gma18g00070 18 581012 585034 PCT
Gma05g01479 05 36601262 36602309 Gma11g02510 11 40262048 40264697 PCT