Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01453 ATGGATTTATCTTCTCTTTTTCTTGTTTTAATCCCTCTGTTGACATCATTTGCTGTTTGCCAACTTGAAGAATTTGTTAGCATTGATTGTGGAGGGACAAGTAATTACACTGATACCAGCACGGGGTTGGCATGGATCTCAGATTCTAGGATCATGCAACATGGCATTTCAGTGGAAGTAGAAAGTCCAAATAGAAGCATGGTGCAGTATCAAAAGCGAAGAGACTTTCCCATAGAGAGCAAGAAGTACTGTTACACACTAAGCACAGAAGAGAGAAGAAGATATTTGGTGAGAGCAACGTTTCAGTATGGAAGCTTGGACAGTGGAGACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACAAAATGGGCCACAGTGTCAATATATGATGCCTCAAGGATATATGTTAAGGAAATGATCATCAGAGCACCCTCAAATTCTATTGATGTTTGCATGTGCTGTGCTACAACTGGTTCTCCTTTTATATCTACCCTTGAGTTGCGGCCCTTGAATCTTTCCATGTATGCCACGGATTTTGAGGACAATTTCTTCTTGGAAGTTGCTGCAAGAATAAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTACCCGGATGACCCGTATGATAGAATTTGGGATTCTGATCTTATTAAAAGGCAAAATTATCTTGTTGGAGTGGCACCAGGCACAGAAAGAATTAGCACAACAAGGAACATAGATATAGAGACAAGAGAATACCCGCCTGTTAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGAGTACTCAGCTACAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCATATTTCGCAGAGATTGAAGATTTGGGTCAGAACGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTAGTTAACATTGCCGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTGACTCTGGAGTTTGTTTTATCATTCTCCTTTGTTATGACCCCGGATTCTACTCGAGGACCTCTTCTAAATGCACTGGAAATAAGTAAATATGTACAGATTGCTTCAAAAACAGACAAGCAAGACACAACTGTTGTAAATGCTTTTCGATTATTGTCTGCTCAAAGTTCCCAGACAAACGAAGGCGATCCTTGTGTTCCAACTCCCTGGGAATGGGTGAATTGTAGTACCACCACACCTCCAAGAATTACTAAAATAATTCTTTCGAGAAGGAATGTGAAGGGTGAAATCCCATCTGAGCTTAGCAATATGGAAGCATTGACAGAGTTGTGGTTAGATGGCAACTTGCTTACTGGACAGTTACCTGACATGAGCAAACTTATAAATCTAAAGATTGTGCATTTAGAGAACAACAAGTTGACAGGTCGACTACCATCTGACATGGGTAGTTTGCCAAGCTTACAGGCATTGTTCATACAGAACAACTCATTTAGCGGGGAAATACCAGCCGGATTAATATCTAAAAAAATCATTTTTAACTATGATGGTAATGCTGAACTACACAGAGGAAAGAAGAAGCATTTTAAGATGGTTTTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTATTCTTAGTAAGTTTGGTACTATTGCTTAATACACGGAGAAAGGCGTCTAAAAAGAAACGTGAGGAAAAAGGAATTTCTGGACGCACTAACAGTAAACCTGGATACTCGTTTCTTCGGGGTGGAAATTTAATGGATGAAAATACTACTTGCTATATTACACTCTCGGAGTTGAAAGAAGCTACTGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTATTATGGGAAAATGAGAGATGGAAAAGAAATAGCAGTTAAAAGTATGAATGAATCATCTTGTCACGGGAACCAGCAATTTGTTAACGAGGTGGCCctcctatccagaattcatcacagaaatttggttcccttgattggatattgtgaagaagaatgtcagcatattctggtttacgagtatatgcacaatggcactttacgggatcaCATTCATGAGAGTTTCAAGAAGCAGAAGTTAGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCCAAAGGTCTTGAATACCTACACACAGGATGCAATCCTAGTATCATTCACCGTGACATAAAGACAGGAAATATTCTCCTAGACATCAATATGAGAGCAAAAGTATCAGACTTTGGACTCTCCAGATTAGCTGAAGAAGATTTAACCCATATATCTAGCATTGCACGAGGAACTGTAGGCTACTTGGATCCTGAGTACTATGCAAGTcagcaattgacagaaaagagtgatgtatacagttttggagttgttctgctagaactgatTGCTGGAAAAAAGCCTGTGTCATCTGAAGATTACAGTGACGAAATGAACATTGTTCACTGGGCAAGATCCTTAACTCATAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTAGAAGGAAATGCCAAAACTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTTGAACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGAACAGAGAATAAGCTAAAGTCTTCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACATTCTTCCCGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACATCTATTCGCCCAAACCACCACCGTGCCACCCCTTCACATACCCAAACAGCAGTGAAGTAGGTGGCGATCATGGAGTTGCAGAGGAAGGTATCGCGGGTGCGGGTGAGATCGAAGATGCGGCGCGCGTGGCCTTAGCACTGTACGGAATCGAAATCGCACTGTTCCGCACCCGCAACTCCCACTCTCCCTTTATCTTCTTCAAACCCATTCCCTTCCCGCCGCCGCAGAAACCCTACCCTCCGTCGACCACCCCTAGCTGGAATGGGTCTCCTTCGTCGACCACTTGA 3051 0.3927 MDLSSLFLVLIPLLTSFAVCQLEEFVSIDCGGTSNYTDTSTGLAWISDSRIMQHGISVEVESPNRSMVQYQKRRDFPIESKKYCYTLSTEERRRYLVRATFQYGSLDSGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIKRQNYLVGVAPGTERISTTRNIDIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGQNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVQIASKTDKQDTTVVNAFRLLSAQSSQTNEGDPCVPTPWEWVNCSTTTPPRITKIILSRRNVKGEIPSELSNMEALTELWLDGNLLTGQLPDMSKLINLKIVHLENNKLTGRLPSDMGSLPSLQALFIQNNSFSGEIPAGLISKKIIFNYDGNAELHRGKKKHFKMVLGISIGVLVILLILFLVSLVLLLNTRRKASKKKREEKGISGRTNSKPGYSFLRGGNLMDENTTCYITLSELKEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMNESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESFKKQKLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELIAGKKPVSSEDYSDEMNIVHWARSLTHKGDAMSIIDPSLEGNAKTESIWRVVEIAMQCVEQHGASRPRMQEIILAIQDAIKIEKGTENKLKSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDIYSPKPPPCHPFTYPNSSEVGGDHGVAEEGIAGAGEIEDAARVALALYGIEIALFRTRNSHSPFIFFKPIPFPPPQKPYPPSTTPSWNGSPSSTT 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01453 1016 SMART serkin_6 605 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01453 1016 MobiDBLite consensus disorder prediction 561 580 - -
Gma05g01453 1016 PANTHER OS07G0107800 PROTEIN-RELATED 12 897 - -
Gma05g01453 1016 ProSiteProfiles Protein kinase domain profile. 605 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01453 1016 SUPERFAMILY Protein kinase-like (PK-like) 591 872 IPR011009 -
Gma05g01453 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Gma05g01453 1016 Gene3D Transferase(Phosphotransferase) domain 1 681 898 - -
Gma05g01453 1016 PANTHER - 12 897 - -
Gma05g01453 1016 Gene3D Phosphorylase Kinase; domain 1 585 680 - -
Gma05g01453 1016 Pfam Malectin-like domain 28 361 IPR024788 -
Gma05g01453 1016 CDD STKc_IRAK 611 872 - -
Gma05g01453 1016 SUPERFAMILY L domain-like 397 504 - -
Gma05g01453 1016 Pfam Protein tyrosine and serine/threonine kinase 607 872 IPR001245 GO:0004672|GO:0006468
Gma05g01453 1016 MobiDBLite consensus disorder prediction 996 1016 - -
Gma05g01453 1016 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Gma05g01453 1016 Gene3D Ribonuclease Inhibitor 368 515 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01453 Gma-Chr5 36360682 36368378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01453 3 922 Receptor kinase-like Gene Family AT1G67720 67.857 0.0 1265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma05g01453 Malectin_like 1.6e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01453 - - gmx:100790944 1770.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01453 05 36360682 36368378 Gma08g00936 08 7888200 7893781 GST