Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01448 ATGAAACTTTCTTCATCGGGTTTTAGTTCTCCACCTCAGGAAGGAGAAAAGCGAGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGAGTGGTATACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAGGGAAGTGGATGGCCATATACCTAACTATCCAAGCTTACCACCGCAGCTTATTTGTCAACTTCATAATGTGACTATGCATGCAGATACTGAGACAGATGAAGTGTATGCTCAGATGACCTTGCAACCTCTTAATCCTCAAGAACAGAAGGAGGCATACCTTCCAGCTGAGTTGGGCACACCGAGTAAACAGCCAACAAACTACTTCTGCAAAATTTTGACAGCCAGTGACACTAGCACTCATGGGGGATTCTCTGTTCCTCGCAGGGCAGCTGAAAAAGTTTTTCCTCCATTGGACTTTTCACAACAGCCTCCTTGTCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAGTGGAAATTTAGACATATCTTCCGTGGCCAGCCCAAAAGGCATCTACTTACAACAGGATGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGAATCAATTGCTTCTTGGCATTCGGCGGGCTAATCGACCTCAACCAGTGATGCCTTCATCAGTGTTGTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCGGCTGCAACTAATAGTCGTTTTACCATCTTTTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCTTTTGCAAAGTATGTTAAAGCCGTGTATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGCTGTTTGAAACAGAGGAATCCAGTGTGCGTCGATACATGGGCACAATAACTGGCATTAGTGACTTGGATTCAGTCCGGTGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACAGCAGGAGAGAGGCAACCTCGAGTGTCTTTATGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTCCCCCTTAGGCTTAAGAGACCGTGGCCTCCAGGACTGCCTTCATTCCATGGCTTGAAGGATGATGATTTTGGTACAAATTCTTCACTAATGTGGCTTCGAGACACAGACAGAGGTCTTCCATCTCTTAATTTTCAGGGGATTGGTGTTAGTCCTTGGTTGCAGCCAAGGCTTGATCCATCAATGGTGAATTATCAATCAGATATGTACCAAGCTATGGCTGCCGCTGCACTTCAGGATATGTGGACTTCAGATCCTTCCAAACAGCATCCTACGTCCGCAATTCAATTTCAGCAACAGCAGAACTTCCCCAACAGGACTTCTGCCTTAATGCAAACCCAAATGTTGCAGCAGTCTCAACCTCAGCAGGCTTTTCCAAATAGTCAAGAAAATTCACATCCATCTCCATCTCCATCTCAATCTCAGGCTCAAACTCAAACACACTTTcagcagcatctacagcatcagcactcattcaatactcagaatcagcataatcttctgcagcagcagcaacaatcgcaattgcaacagcaacaagtggtagatcatcagcagatttcaagtgccgtctctacaatgtCTCAGTTTGTTTCAGCACCTCAGTCTCAATCACCACCAATGCAAGCTATCTCTTCACTTGGCCATCAGCAAAGCTTTTCTGATTCAAATGGGAACCCTGTGACTACTGCTGTTGTTTCTCCCCTGCATAGTATATTGGGTTCATTTCCCCAGGATGACACATCTCACCTTCTCAACCTTCCTAGATCCACCTCTTGGGTTCCTGTTCAACATTCAACTGCATGGCCGTCCTCCAAGCGTGTTGCAGTGGATCCTCTCTTTTCTTCTGGAGCATCTCAATGTGTTCTACCTCAAGTGGAGCAGTTAGGGCAGCCACAGAGTACCATGGCTCAAAATGGCATTGCATTGCCACCCTTTCCTGGTAGGGAGTGTACAATAGAAGGAAGCAATGATCCACAAAATCATCTTTTGTTTGGTGTCAATATAGAGCCCTCATCACTCCTAATGCATAATGGGATGTCAAGTCTTAAGGGAGTCAGCAGCAACAGTGACTCACCCACCATACCTTTTCAATCATCTAATTACCTGAACACCACAGTACCTGATTCTTCATTGAATCCTGGAATGACACACAATATTGGTGAATCGGGCTTCCTGCAAACTCCAGAAAATGGGGGGCAAGGAAACCCAACTAACAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTTGGAAGATCCTTGGACATCACTAAATTCACCAGCTACCCTGAGCTACGCAGTGAGCTTGCTCGTATGTTTGGCCTGGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCGTGGCCGGAATTTGTAAATAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTTCTTAACTCTGTCCCCATTCAGAGGCTCTCTAACGGCGTCTGTGACGACTACGCAGGCCGTGAGGACCCAAGAAATTTAAGCACTGGGATAACAATTGTGGGGTCTTTAAACTACTGA 2727 0.4364 MKLSSSGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGTNSSLMWLRDTDRGLPSLNFQGIGVSPWLQPRLDPSMVNYQSDMYQAMAAAALQDMWTSDPSKQHPTSAIQFQQQQNFPNRTSALMQTQMLQQSQPQQAFPNSQENSHPSPSPSQSQAQTQTHFQQHLQHQHSFNTQNQHNLLQQQQQSQLQQQQVVDHQQISSAVSTMSQFVSAPQSQSPPMQAISSLGHQQSFSDSNGNPVTTAVVSPLHSILGSFPQDDTSHLLNLPRSTSWVPVQHSTAWPSSKRVAVDPLFSSGASQCVLPQVEQLGQPQSTMAQNGIALPPFPGRECTIEGSNDPQNHLLFGVNIEPSSLLMHNGMSSLKGVSSNSDSPTIPFQSSNYLNTTVPDSSLNPGMTHNIGESGFLQTPENGGQGNPTNKTFVKVYKSGSFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVGCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGVCDDYAGREDPRNLSTGITIVGSLNY 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01448 908 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma05g01448 908 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 888 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma05g01448 908 MobiDBLite consensus disorder prediction 481 527 - -
Gma05g01448 908 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Gma05g01448 908 Gene3D - 125 228 IPR015300 -
Gma05g01448 908 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Gma05g01448 908 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Gma05g01448 908 PANTHER AUXIN RESPONSE FACTOR 1 888 - -
Gma05g01448 908 ProSiteProfiles PB1 domain profile. 775 859 IPR000270 GO:0005515
Gma05g01448 908 SMART B3_2 127 229 IPR003340 GO:0003677
Gma05g01448 908 CDD B3_DNA 126 227 IPR003340 GO:0003677
Gma05g01448 908 Gene3D - 771 864 - -
Gma05g01448 908 Gene3D - 291 363 - -
Gma05g01448 908 SUPERFAMILY CAD & PB1 domains 771 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01448 Gma-Chr5 36298030 36305255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01448 1 483 B3 DNA Binding Superfamily AT1G30330 84.221 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma05g01448 B3 1.7e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01448 - - gmx:100777789 1724.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01448 05 36298030 36305255 Gma05g01448 05 36298030 36305255 ECH
Gma05g01448 05 36298030 36305255 Gma08g00929 08 7830095 7835619 GST
Gma18g00149 18 1190519 1197464 Gma05g01448 05 36298030 36305255 PCT
Gma11g02425 11 39610141 39618563 Gma05g01448 05 36298030 36305255 PCT