Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01441 ATGAGGGAAGAGGTTATCAGCTCAGGAGGCACCCTTGATCCAACACCTGCTGCCAGTTCTGCTGGGGCATCATCCCCAGCTGTTCCGAATGTTGGCAGCATAGATGGGTCAAGTCATGGACAAGCCTCTAAAGCGGCTTCTCTCTCATGTGTTGGTTCACAACCACCATGGACTTCCTTGAGCACAAGTGCTGGTGGTTCTGCTTTTGGTTCTTCAAGATCTTCGTGTAGACCTTGGGAAAGGGGAGATTTATTAAGACGTTTGGCTACATTTATTCCTTCAAATTGGCTTGGGAAGCCTCAGATCATCAGTTCATTGGCTTGTGCTCAGAAAGGATGGATGAATAATGGTGTAGACAAAATTGCTTGCGAGTCATGTGGTTCTTGTCTGAGTTTTACAGCATTGCCATCTTGGACATCAGCTGAAGCTCAAAATGCCAGCAAATCCTTTGCCAGGCAGCTGGATTTGGATCATAAAGTTAATTGCCCTTGGAAAGGAAACAGCTGTCCAGAAAGCTTAGTGCAGTTCCCTCCAACTCCTCCATCTGCCTTAATTGGGGGCTACAAGGATAGATGTGATGGACTCGTACAATTTCACTGTCTTCCTGTGGTAGCCATCTCTGCAATTGAGTTGATGTCTGTTTCTTGTGGCCCACAGATTGAACGCTTTCTATCACAGTCTCAGAATTTTATGTCAGGAGAAGTAGACATCAAACCAGACATTATATCTGAGCTTCAAAATTCTCAAGATGAGGCATACTGTTTATATTCTCGTGCACAGAAGCTTATAAGCCTTTGTGGGTGGGAATCAAGCTGGCTTTTAAATATTCAAGATTGTGAAGAACACTCTGCCCAATCTGAAAGAAATGGATATTCTTTAGGCCCAAGCAAGACTCAACTTCATCTTACTCAAGATCCTGGGTCAAAGGCAGTTTCTGCTTCTACTAAATTGGATGCCAGAAAGGCAAAGGCACCTCTTAAGGAGTCTAGACTTGACTCTAGGTTACCTTTGCTTGATTGTAGCTTGTGTGGCGCTACAGTTAGAATTTCAGATTTTCTGACAGTTCCTCGTCCTGCTCGTTTTGCATCTAACAGTATAGATATTCCTGATTCTAGTAAAAAAATAGGATTGACTCGTGGAGCAAGTGCAGCTAGTGGAATCAATGGTTGGATTGCAGCTGATGATACAGAGAAAGATCAGACTGAAGACCGTGACGAAGTTGCAACAACAAATGAGGGGAAATTGTTGGCGAACACGGATTTAGATTTAAATCTTACCATGGCAGGGGGTTTTCCTTTTACTCCTTTGAGCAGGACAGCAACATCTGAATATACTCACGATGATATGGGAAGGGATTTAATGATCGGTCAGCCTTCAGGGAGTGAGATTGGTGATCGTGCAGCTTCATATGAATCACGTGGGCCAAGCTGTCGTAAGAGAAATCTTGAAAAAGGTGGATGCTCTGATAATCGGCCTGTTCTTAGGTTGCAACAGCAGGCTGATAGTGTTGAAGGAATTGTCATTGATCGTGATGGTGATGAAGTTACAGATGGTGGACAATATTCAGCTGGTCCTTCAAAACGTGCACGTGACTCTGATATTTTTGACACATATTGTTCACCTCTTCGAAGAGACTCATCTGGTGCTGGCCCAAGTCATTCAATAGGTTTAGAGGCTTACGCTACTGGAAATCGAATTTCTTCATACCATCAAGGTAGTGACCGCCCAATGGGTATCCAATCAGCTAGGGACTCAACCCGTGCATCATCTGTCATTGCAATGGACACAATATGTCATAGTGTGAATGATGATTCTATGGAAAGTGTTGAAAACTACCCTGGAGATCTTGATGATGTTCATTTCCCCTCCTCTAGCATATACGGCAATGTGGACATGAATGAAACATCTGAACTGAATAACAGCAATCAAGCTCAGCAAAGCACTTGCTTACAAACAGCTACTGAAGTTGCACGTGGTGATGTGGGTGTCAGTAGTACAAACTATGGGGAAGAACTTTTCAATGCAGAAACTGTGACTGCTCAGGCTCGTGATGGAATTAGTTTGGGCATCAGTGGAGGGAGTGTTGGAATGTGTGCTAGTCATGAAGCTGAGATCCATGGGGTTGATATATCTGTGCACAGAGCTGATAGTGTTGTTGGGGAAATGGAACAGAGAGTAGAAGATGCTGAAAATCAGGGACAGACAGGTGAATCTGTTCCAGATCCAGGTCTACTGGATGAGATTATCCCTGATATGAACAGGGAAGATCCTATTGGTGATAGCCAGGAGATGATGTCTCACACTGCAGGAAGAACAGACAGTGGGTCAAAAATTGGCTGTTCTACAAAGGCAGAATCTGTTGAAAGTGGTGAAAAGATTAGTCAAAACTGCAATCTTCTACCTGCTAATAGTAGTCACCCATCTCATTCTTGTAATGCTAACATTTATTCTGGTTGTGAAAATACCAAGGAAGGGCTCATGAAGGATGGTAAATCCTCATTTGCCAACAATCATGCTCTCCCTAAATCAGATTTTGCCATTGCAAATGGGATAGGCCCTCCAAAAGGAGAGAGTAATTATGAAGCTGCAGAGTTTGATCCTATCGTGCATCACAATCAATGTTGCCCTTGGGTGAATGGCAATGTTGCTGTTGCTGGCTGTGCTAGTTCTGTTCCAAGCTCAAGTAATGATGCAATTGCCCTTTGCGGTTGGCAGCTGACGTTAGATGCTTTGGATGCTTTGTCGTTGGGGCACAATGCAATTCCAACAGTACCGTCTGAGTCTGCTGCATCCTTGTACAAGCAGAATGACCAGCAAGCACCTGGTCAAAAACTCTTTCACAACCACTCTATGAGCCAAAGCCATGGTCACTCTGAGATTTTGTTTCGAGTATTGGGTGTTTCCATTTCCTTGATTATAGAGGCGTATTTGACCAAACTATACGTGGTATGCTTGCATATTTCAGTTTCCCTTGCTTAA 2979 0.4374 MREEVISSGGTLDPTPAASSAGASSPAVPNVGSIDGSSHGQASKAASLSCVGSQPPWTSLSTSAGGSAFGSSRSSCRPWERGDLLRRLATFIPSNWLGKPQIISSLACAQKGWMNNGVDKIACESCGSCLSFTALPSWTSAEAQNASKSFARQLDLDHKVNCPWKGNSCPESLVQFPPTPPSALIGGYKDRCDGLVQFHCLPVVAISAIELMSVSCGPQIERFLSQSQNFMSGEVDIKPDIISELQNSQDEAYCLYSRAQKLISLCGWESSWLLNIQDCEEHSAQSERNGYSLGPSKTQLHLTQDPGSKAVSASTKLDARKAKAPLKESRLDSRLPLLDCSLCGATVRISDFLTVPRPARFASNSIDIPDSSKKIGLTRGASAASGINGWIAADDTEKDQTEDRDEVATTNEGKLLANTDLDLNLTMAGGFPFTPLSRTATSEYTHDDMGRDLMIGQPSGSEIGDRAASYESRGPSCRKRNLEKGGCSDNRPVLRLQQQADSVEGIVIDRDGDEVTDGGQYSAGPSKRARDSDIFDTYCSPLRRDSSGAGPSHSIGLEAYATGNRISSYHQGSDRPMGIQSARDSTRASSVIAMDTICHSVNDDSMESVENYPGDLDDVHFPSSSIYGNVDMNETSELNNSNQAQQSTCLQTATEVARGDVGVSSTNYGEELFNAETVTAQARDGISLGISGGSVGMCASHEAEIHGVDISVHRADSVVGEMEQRVEDAENQGQTGESVPDPGLLDEIIPDMNREDPIGDSQEMMSHTAGRTDSGSKIGCSTKAESVESGEKISQNCNLLPANSSHPSHSCNANIYSGCENTKEGLMKDGKSSFANNHALPKSDFAIANGIGPPKGESNYEAAEFDPIVHHNQCCPWVNGNVAVAGCASSVPSSSNDAIALCGWQLTLDALDALSLGHNAIPTVPSESAASLYKQNDQQAPGQKLFHNHSMSQSHGHSEILFRVLGVSISLIIEAYLTKLYVVCLHISVSLA 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01441 992 Pfam C3HC zinc finger-like 78 198 IPR012935 GO:0008270
Gma05g01441 992 MobiDBLite consensus disorder prediction 12 39 - -
Gma05g01441 992 MobiDBLite consensus disorder prediction 509 532 - -
Gma05g01441 992 MobiDBLite consensus disorder prediction 472 486 - -
Gma05g01441 992 PANTHER F20D23.9 PROTEIN 1 957 - -
Gma05g01441 992 Coils Coil 712 732 - -
Gma05g01441 992 MobiDBLite consensus disorder prediction 1 39 - -
Gma05g01441 992 MobiDBLite consensus disorder prediction 287 316 - -
Gma05g01441 992 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 957 - -
Gma05g01441 992 MobiDBLite consensus disorder prediction 449 492 - -
Gma05g01441 992 MobiDBLite consensus disorder prediction 287 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01441 Gma-Chr5 36205855 36214996 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01441 - - gmx:100785647 1962.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01441 05 36205855 36214996 Gma05g01441 05 36205855 36214996 ECH
Gma05g01441 05 36205855 36214996 Gma08g00923 08 7754053 7771388 GST