Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01440 ATGGTGGATTCATGCTATGTGGGAAGATATGAACTGGGTCCAACCCTGAGCGCGGGAAACTTCTGCATGATCAAGCTTGCACGTGACGTTAACACCGGATACACTGTAGCCATAAAAATGCTCCACAAAACACTTATCTGCAACCAAATCATGGGCGTGACAAACAGCAGGTCACTGACAGAACTGGAAGCAAGAAAATATTTTCAGCAGCTTATATGTGCTGTGGCTTTCTGTCACAGTAGAGGTGTTTCCCATGGAAACTTAAAGCCAGAGAATTTGTTGCTGGATGCTAAGGGGGTGCTTAAAGTATCAGATTTTGGAATGAGGCCACTGTTTCAACAAGTTCCAGTGGCAAGCATCACTTGCTATGAGGGTGCACAGGCTGATATATGGTCATGTGGTGTTATTCTTTTTGTTCTATTGGCCGGTTATTTACCCTTCAATGATAAAGACATTTATCTAAAGAGATGCCAGGCTGATTTCACTTGTCCTTCATTTTTTTCTCCAAGTGTAACGAGACTAATTAAGAGAACCCTTGATCCCTGTCCTGCTACACGGATTACAATTGATGAGATCTTGGAGGATGAATGGTTCAATAATGAGCATCAACCTACTAGATCGTTCCAGGAAAATATTAGTTCTGATAAAGATTCAAAAAATGTTGTTGGGGAGGGGCAAGATGCGGGGCCTTCAGCATCTGTGACTAGGAATGCATTCAAAAAGTCTCTTCACTTGAGCCTTGTTCGGAATCTTTTCAATAAGGCGCTTGCTAAAAGGGAAACAAGTTTCATATCCAAATGTTCTGCAAATGAGATAGTTTCAGGAATTGAAAATAGAGCAGCGTCTATGGGTTTCAATATTAAGAAGAGAAACTATAAGTTGAGGATTGAAGGTGAACGAGCTCAACGCAAAGGTCATCTATCAATATGCACTAAGATCTCTGAGGCAGACCCTCCCTTTCACACGGTTGAGATTCGGAAGACTGGAGGCGATACTCTGGAATTTGACAATTTCTGTAAGGATCTCTCTGCTGGGCTGCAAGATATCATTTGGAAAGAAGAGCCTGTCAACACAGAAAAAGATGGTGCGAGTACATCAAGTGCAAAATAA 1110 0.4189 MVDSCYVGRYELGPTLSAGNFCMIKLARDVNTGYTVAIKMLHKTLICNQIMGVTNSRSLTELEARKYFQQLICAVAFCHSRGVSHGNLKPENLLLDAKGVLKVSDFGMRPLFQQVPVASITCYEGAQADIWSCGVILFVLLAGYLPFNDKDIYLKRCQADFTCPSFFSPSVTRLIKRTLDPCPATRITIDEILEDEWFNNEHQPTRSFQENISSDKDSKNVVGEGQDAGPSASVTRNAFKKSLHLSLVRNLFNKALAKRETSFISKCSANEIVSGIENRAASMGFNIKKRNYKLRIEGERAQRKGHLSICTKISEADPPFHTVEIRKTGGDTLEFDNFCKDLSAGLQDIIWKEEPVNTEKDGASTSSAK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01440 369 PANTHER SERINE/THREONINE KINASE 5 51 - -
Gma05g01440 369 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 122 358 - -
Gma05g01440 369 SMART serkin_6 10 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01440 369 PANTHER SERINE/THREONINE KINASE 58 110 - -
Gma05g01440 369 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 51 - -
Gma05g01440 369 CDD CIPK_C 237 346 - -
Gma05g01440 369 Pfam NAF domain 250 289 IPR004041 GO:0007165
Gma05g01440 369 PANTHER SERINE/THREONINE KINASE 122 358 - -
Gma05g01440 369 Gene3D Transferase(Phosphotransferase) domain 1 47 228 - -
Gma05g01440 369 Gene3D Kinase associated domain 1, KA1 234 352 - -
Gma05g01440 369 SUPERFAMILY Protein kinase-like (PK-like) 7 206 IPR011009 -
Gma05g01440 369 MobiDBLite consensus disorder prediction 205 232 - -
Gma05g01440 369 Pfam Protein kinase domain 55 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01440 369 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01440 369 MobiDBLite consensus disorder prediction 205 219 - -
Gma05g01440 369 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 58 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01440 Gma-Chr5 36198342 36203011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01440 53 368 CBL-interacting serine-threonine protein kinases AT1G30270 47.887 3.89e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Gma05g01440 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01440 - - gmx:100820011 632.869