Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01372 ATGTGCATGTTTAATCTCAGATGGGATACGCCTATTCATGTGGATGCTGCTAGTGGTGGCTTTATTGCTCCTTTCCTTTACCCAGAGCTAGAATGGGATTTCAGACTCCCATGGGTGAAGAGCATAAATGTAAGTGGCCACAAGTATGGGCTTGTTTATGCTGGCATTGGTCGGGTTATATGGAGAACCAAGGATGACTTGACAGAAGACCTTGTCTTCCATATTAACTACCTTGGAGCTGACCAAACCACCTTCACCCTCAACTTCTCTAAAGATGATTTGATTATAATCTATGTTCTAGTCAGATCATTGCTCAATCAGCTAATTCGACTTGGCCAAGAGAAGTGA 348 0.4282 MCMFNLRWDTPIHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYAGIGRVIWRTKDDLTEDLVFHINYLGADQTTFTLNFSKDDLIIIYVLVRSLLNQLIRLGQEK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01372 115 Pfam Pyridoxal-dependent decarboxylase conserved domain 7 103 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma05g01372 115 Gene3D - 3 115 IPR015421 GO:0003824
Gma05g01372 115 PANTHER GLUTAMATE DECARBOXYLASE 7 114 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma05g01372 115 PANTHER GLUTAMATE DECARBOXYLASE 5-RELATED 7 114 - -
Gma05g01372 115 SUPERFAMILY PLP-dependent transferases 7 96 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01372 Gma-Chr5 35361660 35363162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01372 8 114 Calmodulin-binding Proteins AT3G17760 78.505 2.04e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01372 K01580 - gmx:100781791 177.948