Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01363 atggccAACAGGGTTCAAATTCCTACCAACAATTCAGCACTCATTGCTATGATTGCAGATGAGGATACTGTAGTTGGATTTTTGTTGGCTGGAGTGGGAAATGTTGACATACGTAGGAAGACAAATTACCTCATTGTGGATTCAAAAACAACCGTCAAACAAATTGAGGATGCATTCAAAGAATTTACAACAAGGGAGGATGTTGCAATTGTGCTGATTAGCCAATATGTTGCAAATATGATAAGGTTTTTGGTTGATAGTTATAACAAGCCCGTTCCTGCAATACTTGAAATCCCTTCTAAAGATCATCCTTATGATCCGGCACATGATTCGGTTCTGTCACGAGTGAAGTATCTCTTCAATACCGAATCAGTTGCATCTGGGAGACGCTGA 393 0.3893 MANRVQIPTNNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFKEFTTREDVAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFNTESVASGRR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01363 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Gma05g01363 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Gma05g01363 130 SUPERFAMILY AtpF-like 15 117 IPR036906 GO:0034220
Gma05g01363 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Gma05g01363 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Gma05g01363 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Gma05g01363 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01363 Gma-Chr5 35294187 35297848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01363 1 126 Primary Pumps ATPases(2) AT4G02620 86.508 8.37e-81 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01363 K02151 - gmx:100780523 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01363 05 35294187 35297848 Gma08g00849 08 6946671 6952320 GST