Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01355 ATGCATGAGCAAACCGGTTGCTTTGATCCCAACACAATGGGAGAAAGTGTACCCTTTCTAAAGGATAACTTTCCTCAAACTCTACCTCCATCACCTATAGTTGTAGGAAACACCACAAACAGCAACAATAATAGTCTTGAACAGAATCTCAGGCTTTCTGTGGAGGAGCTCTCCTATAACCATTACTACCCACAACACCAAGAAGATCATGTCTCCACCTATGTAAGTGGAGTAACTGCCACATCTATTGAAATCCCACATCCACAACATCTAGGTTTGAACATGGGAAACTCCTACATCAACAACAACAACAACATGGATAACCATTTGGTGCAAGAGGTCATTGATGCCTATCCCTATCAGCTGTCCACTTGGGACCCTGCTACTGTTCAGGAATTACAAGACATAGCCTATGCTAATCACACAGAACAACAACAACAACAACAACAAAATGAACAACAATTTCAGCAAATTGAGACTCAAAACTGCAGCCAAAGTTACAACAACCCTTCTTCCATACTAGACCCTCCTTACCCTTCACCAGATCTCCTAAACCTTCTCCACATGCCAAGATGCTCAGCCTCATCTTTGCTCACCAATCCCTCCATTTGCCTCACAAACCCAACTCAGAACACACCAAACTTTCAGAATCCAATGGCCTTTCTTGGAGACCTTACAATAGGATCAGAAAACACAAGTGCATCCTCAGTTTTGTATGATCCTCTATTCCATCTGAACCTGCCTCCACAGCCTCCAGCACTCAGAGAGCTGTTTCAGTCTCTCCCCCGTGGCTATAGCTTGCCAACCAACTCAAGGAATGGCTCACTCTTTGCTGGAGGGGATGAGATGGAGGGTGATGGGAGCCAGCTTGACATGGGAGTGCTGGAATTCAACAGGGTCACACCTTCTGTAGGCAAAGGAAGGGGAGGCAAAGCTACCAAACACTTTGCAACTGAGAAACAAAGAAGAGAACAACTCAATGGAAAATACAAAATCTTGAGGAATCTCATCCCAAGCCCCACAAAGATTGATAGAGCATCTGTGGTGGGGGATGCCATTGACTATATAAGAGAGCTGATTAGAACTGTCAATGAGCTCAAACTACTGGTGGAGAAGAAAAGATACGCTAAGGAGAGGTACAAGAGGCCAAAAACAGAAGAAGATGCTGCTGAGAGCTGCAACATAAAGCCTTTTGGTGATCCAGATGGGGGCATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGCGAGGTTGATGTCCGGATCATCGACGATGATGTCACAATCAAACTCTTCCAGAGGAAGAAGATTAACTGCCTGCTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGTTGGAGCTTCACCATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATGGAAGGTTCTTCAGTCTATGCAAGTGCCATAGCCAACAGGGTGATTGATGTTCTGGACAGTCAGTACACAGCAGCAGTTCCACATACAAACAGCTATTAG 1527 0.4479 MHEQTGCFDPNTMGESVPFLKDNFPQTLPPSPIVVGNTTNSNNNSLEQNLRLSVEELSYNHYYPQHQEDHVSTYVSGVTATSIEIPHPQHLGLNMGNSYINNNNNMDNHLVQEVIDAYPYQLSTWDPATVQELQDIAYANHTEQQQQQQQNEQQFQQIETQNCSQSYNNPSSILDPPYPSPDLLNLLHMPRCSASSLLTNPSICLTNPTQNTPNFQNPMAFLGDLTIGSENTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTNSRNGSLFAGGDEMEGDGSQLDMGVLEFNRVTPSVGKGRGGKATKHFATEKQRREQLNGKYKILRNLIPSPTKIDRASVVGDAIDYIRELIRTVNELKLLVEKKRYAKERYKRPKTEEDAAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIMEGSSVYASAIANRVIDVLDSQYTAAVPHTNSY 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01355 508 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 310 359 IPR011598 GO:0046983
Gma05g01355 508 PANTHER TRANSCRIPTION FACTOR BHLH91 1 507 - -
Gma05g01355 508 CDD bHLH_AtMYC1_like 315 381 IPR045896 -
Gma05g01355 508 MobiDBLite consensus disorder prediction 141 179 - -
Gma05g01355 508 SMART finulus 316 365 IPR011598 GO:0046983
Gma05g01355 508 MobiDBLite consensus disorder prediction 141 173 - -
Gma05g01355 508 Pfam Helix-loop-helix DNA-binding domain 313 359 IPR011598 GO:0046983
Gma05g01355 508 Gene3D - 308 384 IPR036638 GO:0046983
Gma05g01355 508 PANTHER TRANSCRIPTION FACTOR BHLH91 1 507 IPR045895 GO:0006355|GO:0048658
Gma05g01355 508 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 308 374 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01355 Gma-Chr5 35228047 35230645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01355 1 508 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 39.272 7.29e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma05g01355 HLH 1.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01355 - - gmx:100801349 961.059