Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01352 ATGTCCTCTCCTTTTTCGTACACATTCCCTATCAGTGGTGCTGGTACTAGCAATTACAGCACTTCCACTCCATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAGAGGCTTCTTGACCGTGTCATAGCCTTTCTTCCTCCACCAGCATTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCACTTCTCTTCTCCAACACCTTCCTCGAATTGTACCTTCAAGTCTCACCACACCAGCACTGGTTCTTGTTCTTCAAGCACCACAAGACCCGCAAGAGCTACATCTACAAGAACAACAACAATGGAACAAGTGGTGGTTGTGGACATCACGGTGGTGCGTTTGAAGGGTACCTCTTTGACCCCTATGAGATGGCATGGTACCGCATTTCCTTTGCTTTGGTCCCTTCTGGCTTCTCTCCAGCTTCATCTTCTGCCGGTTTACTTTGCTGGGTTTCTGATGAGGCTGGTCCAAAGACCATGCTTCTGAGCAACCCTTTGATCGGTTCTCTCACTCAGCTACCTCCAACATTAAGACCTAGACTCTTCCCTTCCATTGGCTTAACCATTAGCCCCACCTGCATAGATGTCACTGTTGCTGGTGATGACATGATATCCCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATCGATGGAGGAGGTTTTTTCTCCTTGTGGGGCACCACCTCTTCTCTTCCAAGGCTCTGCAGCCTCGAATCTGGAAGAATGGTTTATGCTGAAGGAAAATTCTACTGCATGAATTGTAGCCCTTTCAGTGTTTTGGCTTATGACATCACCTCAAACACTTGGTTCAAAATACAAGCCCCAATGAGGAGGTTTCTAAGGTCTCCAAACCTAGTTGAGTGCAAGGGGAAGCTTCTTCTTGTTGCTGCTGTGGAGAAGAGCAAGCTCAACGTGCCAAAgagtttgagggtgtggagtttgcaggcgtgtggGACAATGTGGGTGGAGTCAGAGAGAATGCCGCAGCAGCTTTATGTTCAGTTTGCTGAATTGGAAGATGGGAACGGGTTTGAATGTGTAGGGCATGGTGAGTTTATTGTCATCATGATCCGTGGAACGGACAAGGCCTTGCTGTTTGATATATGCAGGAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACATTGCACATGATGGATTTGAGTTGCATGGTTTTGCATATGAGCCTAGGCTTGCCACCCCTGTCACTGGCCTCCTTGATCAATTGGCACTGCCCTTCCAGAGTTTCAATGCTTAG 1272 0.4631 MSSPFSYTFPISGAGTSNYSTSTPWMNSRIWSKLPQRLLDRVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPHQHWFLFFKHHKTRKSYIYKNNNNGTSGGCGHHGGAFEGYLFDPYEMAWYRISFALVPSGFSPASSSAGLLCWVSDEAGPKTMLLSNPLIGSLTQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFFSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNTWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYVQFAELEDGNGFECVGHGEFIVIMIRGTDKALLFDICRKRWQWIPPCPYIAHDGFELHGFAYEPRLATPVTGLLDQLALPFQSFNA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01352 423 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 31 404 - -
Gma05g01352 423 Pfam F-box domain 31 65 IPR001810 GO:0005515
Gma05g01352 423 PANTHER F-BOX/KELCH-REPEAT PROTEIN 31 404 - -
Gma05g01352 423 Gene3D - 26 71 - -
Gma05g01352 423 SUPERFAMILY F-box domain 24 103 IPR036047 GO:0005515
Gma05g01352 423 SMART fbox_2 34 74 IPR001810 GO:0005515
Gma05g01352 423 ProSiteProfiles F-box domain profile. 28 77 IPR001810 GO:0005515
Gma05g01352 423 SUPERFAMILY Galactose oxidase, central domain 55 386 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01352 Gma-Chr5 35205861 35207132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01352 - - gmx:100805253 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01352 05 35205861 35207132 Gma08g00832 08 6840973 6842289 GST