Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01310 ATGTACTTTGCAATAACAATAAAGAGATACCGAGCTGTGAAGGAAGTTGGACAAATTAAGATGAGTGTTGGAGTTAACCAATTGATGCTTGTTTGCCAGGCCGAATATTTTCGTCAGTTGCTTAAACCTGTTACGAACTTCCTTCCAGCTTTAGTACAGAATAATTGCCAGTTGCATAGGCTAAATCAGCATTGCTTGCTCGAACGTCAGTCAGATTCAACAGATAATATAATGCAGACTCAGGAATATTTTCTCCCGGATAAGATGGTACTTCCTTTGGCAGATGAGGCCATTGATCCTCATATGCGTGCTCCACTTGCTTCTGCCTTTGATGCATATTTACCTCCAGGTGTGAGGCAGATAACACCCTTCGAAAGATTTAATGTGCAACCCTCTGAGGCTTGCCCCAAGAACTTTGTTATCTTTGATCAAACAGATCAACGAAGCAGGATCATGTTCCATCCTGCAATGACCTACAAATTTAACAGTCCTGGCTTAAATGTTCATGCTACTGGTTCTCAAGATTTTGAGAAAAATAAAGCCAATCAAATGGAAAGAGAAGTGTCATCTCCTTTTGAAGAAGATCCTAATGACATTGACGCATTGTTGAGCATAGGAGTGGATGAACTAGATGACTTTGACGAGGAAGAAGTCAGCACAGCAAGGACTCAAGAAAATTATGAAAGTTTATCCGATACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAGGTCATCGTCATCTTCTGTACAGAAGTCGTCTGGGGCCGGGGGTTTCTGCCACAATGAAGGGAAGCACTGGGAGATGAAGAGGATGGTGAGGATGTTGAGAAAGATTGTGCCAGGTGGAGGTAATCAAATGGATTCTGTTGCTGTTTTAGATGAAGCTGTAAAATACCTCAAGTCTCTCAAAGTTGAGGTTGAACAATTCGGGGTTGAACCATGA 945 0.4169 MYFAITIKRYRAVKEVGQIKMSVGVNQLMLVCQAEYFRQLLKPVTNFLPALVQNNCQLHRLNQHCLLERQSDSTDNIMQTQEYFLPDKMVLPLADEAIDPHMRAPLASAFDAYLPPGVRQITPFERFNVQPSEACPKNFVIFDQTDQRSRIMFHPAMTYKFNSPGLNVHATGSQDFEKNKANQMEREVSSPFEEDPNDIDALLSIGVDELDDFDEEEVSTARTQENYESLSDTCSSYCSKSRKRSSSSSVQKSSGAGGFCHNEGKHWEMKRMVRMLRKIVPGGGNQMDSVAVLDEAVKYLKSLKVEVEQFGVEP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01310 314 PANTHER TRANSCRIPTION FACTOR BHLH144 78 313 - -
Gma05g01310 314 PANTHER TRANSCRIPTION FACTOR BHLH145 78 313 IPR037546 -
Gma05g01310 314 MobiDBLite consensus disorder prediction 239 256 - -
Gma05g01310 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 268 310 IPR036638 GO:0046983
Gma05g01310 314 MobiDBLite consensus disorder prediction 239 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01310 Gma-Chr5 34779345 34780922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01310 93 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 42.259 1.24e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01310 - - gmx:100791998 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01310 05 34779345 34780922 Gma08g00790 08 6476783 6477469 GST