Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01309 ATGTCGGGATTCAGAGACACTCACGGTTTTCCTCGTCCAATCCTCGCTGTGAATCTCGCTCTCGCTCTTCTCCACGCCGCCGTTGCGTTCCTCGCGTTCTTTCAGTTGCTGAGAATTCACATGAGGAATGCGCAGCTTGGTTGGACTCGGCAAAAGGTGTTCCATGTATTGATTGGCTCTTCTAATTTGGGTTATGTCATTTATTTGGCATTGACAATTGTTGCTTCCTGCAAGGGATGGACCTGTTGGTCGCACTCTTGTGGTTTCATATTTATGGCTTTCCCCAAAGTACTTTTTTTTGCAGCATTTCTTCTTCTTTTATCCTTCTGGGTTGACCTTTGCCATCAGGCAGATGATGATGATGACTATGAAGGAAGTTTTTGTGACAACCCTTTGCTGGAGAAGACTTTAAATGAATCAAATTTAGCAAGCATAGATAGCCATAGAAAGTGCTTTCCTTTTCGGTTTGCTCGTGTTGGAAATCGGCAAAAAATTGTGATTTTGGTTACTTTGCTAGTTTTCATCATCGTGGTTGCTTTTGCTGTAGTAATCTGGATTGGGCTAGGAAAGAATCCCATTGATTCTGAAGTGGCAGCTCGGATATATTTATATCTTTCTGCTATTGGGATGCTTTTGTTGGGAGGAGCATTAGCATGCTATGGAATTCTATTATGCTTGAAAATGAGCAAAGTGAGAGCCGAGAAACCTTCATCTGAAATGTGGAAGGTTGCAGGTTTAACTATTGTCTCTGTAATATGCTTCACATCAAGTTCCTGTGTAGAACTTTTAACCGACATCCCTATGCAGTATAACTGGCATCAGCGGCGTCTGAATGATGTTTACTCCTCTCTTTTACTCATTTTGTATTATTTTGTGGGTTCATCAATACCTTCAGCAGTGGTACTGTGGGTAATGAGAGAATTACCACCTGAAGAAGCTGCTAGCATACCCGAAGAATCAAGTACAATAGCTTTTGTTGCTGATAGTTCAATTGCAATCCATCATCCTCAACGCTGGGCTACAGCAACAAGCATGCAGAATCAGCACTTTAAGATTCACATTCATATTGTTTCCTACAAGTGTCATCGCACAAGACATCAAGAGCGAGTCCTATATGATTATGCATTAACCTTTGCAAATATATCTTGGTCTGCTGGAGTTTGGACAGCTTAA 1173 0.4152 MSGFRDTHGFPRPILAVNLALALLHAAVAFLAFFQLLRIHMRNAQLGWTRQKVFHVLIGSSNLGYVIYLALTIVASCKGWTCWSHSCGFIFMAFPKVLFFAAFLLLLSFWVDLCHQADDDDDYEGSFCDNPLLEKTLNESNLASIDSHRKCFPFRFARVGNRQKIVILVTLLVFIIVVAFAVVIWIGLGKNPIDSEVAARIYLYLSAIGMLLLGGALACYGILLCLKMSKVRAEKPSSEMWKVAGLTIVSVICFTSSSCVELLTDIPMQYNWHQRRLNDVYSSLLLILYYFVGSSIPSAVVLWVMRELPPEEAASIPEESSTIAFVADSSIAIHHPQRWATATSMQNQHFKIHIHIVSYKCHRTRHQERVLYDYALTFANISWSAGVWTA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01309 390 PANTHER OS01G0751300 PROTEIN 5 349 - -
Gma05g01309 390 Pfam THH1/TOM1/TOM3 domain 171 314 IPR009457 -
Gma05g01309 390 Pfam THH1/TOM1/TOM3 domain 17 117 IPR009457 -
Gma05g01309 390 PANTHER TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1 5 349 IPR040226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01309 Gma-Chr5 34769175 34777309 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01309 - - gmx:100790769 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01309 05 34769175 34777309 Gma05g01309 05 34769175 34777309 ECH
Gma05g01309 05 34769175 34777309 Gma08g00789 08 6461074 6474895 GST