Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01305 ATGGCGAAAAAGGCAAAAGGGTCTCACTCTGCTTCTTCTGCCTCTGCATCTTCTTCGTCCGACAAACTAGTGCTGAGGATTAAATCAAATGAGGGGACCAAGAGATCAGTGCGGCAAACTAATTCAAGAAAGAAACTTAAAGCAAAGCAAAAGAAGAACAAACAAAAGTTTGATGCTATGAAACCCAGGAAACCTCCTACAGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATGTAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTACAATACTATGATATAGCAACAAAAAAACGTGAAGAATTTGATAGCGCAATGGCAGAATTTAACAAGAAAATGGAAAATGGCGAGTTTGACGAAACTGATGATGAATCAGAGTTTGATGAGTAA 453 0.3885 MAKKAKGSHSASSASASSSSDKLVLRIKSNEGTKRSVRQTNSRKKLKAKQKKNKQKFDAMKPRKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATKKREEFDSAMAEFNKKMENGEFDETDDESEFDE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01305 150 Gene3D High mobility group box domain 57 146 IPR036910 -
Gma05g01305 150 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 1 149 - -
Gma05g01305 150 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 1 149 - -
Gma05g01305 150 MobiDBLite consensus disorder prediction 1 62 - -
Gma05g01305 150 CDD HMGB-UBF_HMG-box 62 128 - -
Gma05g01305 150 Pfam HMG (high mobility group) box 62 131 IPR009071 -
Gma05g01305 150 MobiDBLite consensus disorder prediction 8 26 - -
Gma05g01305 150 SUPERFAMILY HMG-box 49 138 IPR036910 -
Gma05g01305 150 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 62 131 IPR009071 -
Gma05g01305 150 SMART hmgende2 61 132 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01305 Gma-Chr5 34741751 34745144 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma05g01305 HMG_box 2.1e-17 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01305 - - gmx:100305607 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01305 05 34741751 34745144 Gma08g00786 08 6444858 6447979 GST