Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01304 ATGGAAAGTCTTATCTTTAAAATCATTATATTTACTGGAAGTTCTTTTTCATTCTTAAGGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATGTAATGTCAATGCGTGATATTGGCAAGGCATATGCATCGAAGTGGAAACCAATAATTTATGAGGAGAAGGTTAAATGCTATGATATTGCATCAGAAAAACGTATAGAATTTGATAGAGCAATGGCAGAATTTAACAAGAAAATGGAGAAGGCTCAATACTTTGATATAGCAACAAAAAAACATGATGAATTTGATAGTGCAATGGCTGAATTTAACAAGAAAATGATAAGCAATCTATCATTTTTGCTGGCTAGTGAGCTGACTCTTGTTGATGAAACTGATGAGGAATCTGAGTTTGATGAGTAA 405 0.3284 MESLIFKIIIFTGSSFSFLREDFRKEFQEQNPDVMSMRDIGKAYASKWKPIIYEEKVKCYDIASEKRIEFDRAMAEFNKKMEKAQYFDIATKKHDEFDSAMAEFNKKMISNLSFLLASELTLVDETDEESEFDE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01304 134 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 14 78 IPR009071 -
Gma05g01304 134 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 15 84 IPR031061 -
Gma05g01304 134 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 82 110 IPR031061 -
Gma05g01304 134 SUPERFAMILY HMG-box 23 81 IPR036910 -
Gma05g01304 134 Gene3D High mobility group box domain 12 82 IPR036910 -
Gma05g01304 134 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 15 84 - -
Gma05g01304 134 CDD HMG-box 14 75 - -
Gma05g01304 134 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 82 110 - -
Gma05g01304 134 Pfam HMG-box domain 14 76 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01304 Gma-Chr5 34736059 34739627 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma05g01304 HMG_box_2 1.2e-06 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01304 - - gmx:100809401 109.768