Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01288 ATGGAAAAGGAGCCTCTGCTCCCATACTTCAGCCCCAGAAAGAAGCCTCAACTATGTCCCTTGCCAGAGCACGACGAAATCGTTCTTCCAATGACCCCTTCAGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGGGACCCTTCACCTCTTGCTGATGCCTTAACACTTTCTCACAATTCCCCAAAATGTTCCTCTTCTAACTCACAGGACTATGCATCATCACCACTATTTGATTCCCAACAAAAACAACAACAACTCAACTCTTGGCTCCTTGACCCCAATTACGAGTCGTGGCGGAAAACGAACCTTCATCGGTCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAATCCCCACTCCACCGTGCAAAGACCCAAATTTGCCAGCCAGAGTATTGTGTGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTACGGTGATATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGAAGGAGGGGTGAGAAGGATGGGAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCGTTGGGGGTTGTGGTGATTTGTATTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTCGGTTATGTCTGTTACGACGGTTGGGTATGGAGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTCCTCTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCAGCAGACATAGACAATAATGGCTTTGTGAGTAAATCGGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACATCATGCAGTGTTGCCAATTTGAGAAGGGAGTGTCAGATTCTCAAGTTGATGGGAACTTTCTTCTTCTGGGGATTGGGAGGGATATCAGGTTGTCAAAGACGCAAGCTGGTGATTTTCCCCTTACCCTCTTGTCATGA 1329 0.462 MEKEPLLPYFSPRKKPQLCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSHNSPKCSSSNSQDYASSPLFDSQQKQQQLNSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHSTVQRPKFASQSIVCQGVILLALYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVGVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQCCQFEKGVSDSQVDGNFLLLGIGRDIRLSKTQAGDFPLTLLS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01288 442 MobiDBLite consensus disorder prediction 39 84 - -
Gma05g01288 442 Gene3D - 139 240 - -
Gma05g01288 442 SUPERFAMILY Voltage-gated potassium channels 138 227 - -
Gma05g01288 442 MobiDBLite consensus disorder prediction 60 84 - -
Gma05g01288 442 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Gma05g01288 442 Gene3D - 251 361 - -
Gma05g01288 442 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 88 404 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma05g01288 442 SUPERFAMILY Voltage-gated potassium channels 256 362 - -
Gma05g01288 442 PRINTS Two pore domain K+ channel signature 304 313 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma05g01288 442 PRINTS Two pore domain K+ channel signature 184 212 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma05g01288 442 Pfam Ion channel 148 227 IPR013099 -
Gma05g01288 442 Pfam Ion channel 272 341 IPR013099 -
Gma05g01288 442 PANTHER TWO-PORE POTASSIUM CHANNEL 3 88 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01288 Gma-Chr5 34550019 34557476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01288 4 406 Ion Channels AT4G18160 62.830 7.31e-172 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01288 K05389 - gmx:100787238 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01288 05 34550019 34557476 Gma05g01288 05 34550019 34557476 ECH
Gma05g01288 05 34550019 34557476 Gma08g00774 08 6327618 6335180 ECH
Gma05g01288 05 34550019 34557476 Gma08g00774 08 6327618 6335180 GST