Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01280 ATGCTTTCATTTCTTTCTCAAAGTTTCCAAACTCTTTTGTTTGTCATATCCTCAGAACTCAACCAAGACAAAGTCATGCATCAAACAAATATGATGAAGCAGCCAGAGGATAACTTTACTATAGAAGAGAATTATAATGAGAATAAGGATAAGAATGATGTTGGTGACAACACGGATGCAGAAAAAGCAAATGATGATGATGATGATGTAGTGGATGACCATCAAGAGGAAGCAAAGTACTTACCAGAGGATGATGGTCCAACGGCTACAGAGGAACAACACTACAAAGGTACAGTCACAAAAGATGCAGATGAAAAGAATAAGCCTCCTACACGACATTTCATCCATGGATATCACTTGATCCAAGGACAGATGAATCAACACAGGAATCTCGATGGTTATGACTTAGGGTTGTATGCAATATTTGAAGTGCATGCTGTTAAGAAAGCATGTAAAGCCATGGATGATGAGATTTTAGAAAGCATAGCTGATTCTCGTGGAGGATCAACAGCTGTTGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTAGTCAATGTTGGTGATTCTCGAGCAATATCATGCAAAAATGGTCGAGCAAAACCACATACTGTGGATCATGAACCAGAGAAGGAAAAAGATCTTATTGAGAGTAGAGGAGGTTTTGTGTCTAAGAAACCAGTTAGGGAATGTTCCCAGAGTGGATGGCCAATTAGCAATGGCATGAGCATTTGGAGATGGAAAACTGAAGGAGCACATTACGGCAGAACCATTCGGAAGATCGATGAAGACACTGAATTCATCATTTTGGCAAGTGATGGCCTATGGAAGGTACGAGGATATTGCATGTATCTTATGATTACTGATGAGGACACTTTGGCTGAAGTAGAGCACTAA 897 0.3969 MLSFLSQSFQTLLFVISSELNQDKVMHQTNMMKQPEDNFTIEENYNENKDKNDVGDNTDAEKANDDDDDVVDDHQEEAKYLPEDDGPTATEEQHYKGTVTKDADEKNKPPTRHFIHGYHLIQGQMNQHRNLDGYDLGLYAIFEVHAVKKACKAMDDEILESIADSRGGSTAVAAILINGVKLLVVNVGDSRAISCKNGRAKPHTVDHEPEKEKDLIESRGGFVSKKPVRECSQSGWPISNGMSIWRWKTEGAHYGRTIRKIDEDTEFIILASDGLWKVRGYCMYLMITDEDTLAEVEH 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01280 298 MobiDBLite consensus disorder prediction 47 108 - -
Gma05g01280 298 SUPERFAMILY PP2C-like 144 279 IPR036457 -
Gma05g01280 298 ProSiteProfiles PPM-type phosphatase domain profile. 115 298 IPR001932 -
Gma05g01280 298 Gene3D - 140 296 IPR036457 -
Gma05g01280 298 CDD PP2Cc 146 278 IPR001932 -
Gma05g01280 298 PANTHER ALPHABET, ISOFORM E-RELATED 144 278 - -
Gma05g01280 298 MobiDBLite consensus disorder prediction 74 108 - -
Gma05g01280 298 Pfam Protein phosphatase 2C 145 225 IPR001932 -
Gma05g01280 298 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 144 278 - -
Gma05g01280 298 SMART PP2C_4 96 296 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01280 Gma-Chr5 34481970 34486138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01280 112 281 PP2C-type Phosphatase Gene Family AT2G34740 41.014 7.91e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01280 - - gmx:100814772 360.147