Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01258 ATGGTTACGATTTCTTCAACTTGGTACTTGTTTCTTCCCATAATTTTATCGTTATGCCCCATAACACTATGTGCATCAGTGCTAGAAGACCTCAAAAACTTACATCAACCACCAGATTTTAACTCTACAATTTTCTCCAACTGTCTCAAGAACCCGTCTCTAAGGTACTGCAGTTCCTCTCCCATGTTGGACCTTGATGAAATATTCAAGTTCACTATTGTTGCAAGCCATCTCTGCAATGAGTCAAAGAATCCCAATTGTGTGGAGTCATTCCCCAAAGTTGATCTTAGAAACCGACCAAACATTGCACCTCTTTATTTGTCCTTCGATTTCTTTTGGAAGTATTGCCCCTTAAGCATTATGTCCATTGATTTGTCAAACAATTCTATGAAGGGTGATTTTCCAACTGATGTTCTCTATTGCACTCAAATCCAGTCTCTTGATCTAAGTATCAATGCATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTCCCCTTACCAACCTCACTTTTCTCAACCTCTCCTATAACTGCTTCTCAGAGAGTAAACTCTCTGATTCCCAATTCTTCAAAAGGTTTAACTCTTCTAGTTTTCTTCATTCTGGTGCTCTTTTGGATCAAAAAAGGTTTACAGTAAAGGCTATTTTTCTATTGGTTGGCTTTCCCATCCTTGTCATTTTGATGGTAATTTGCTTTTTATGGCTTTGTTTCCAAAGGCCTGATTTTCTACCAAGTAAACTTCAAAGAAGTAGGAGGTTTACACCGGCAATTCTAAAGGCAGCAACTAATGATTTTTCAAATAAGTATTTGGTAGGAAAGAGTGATGTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAGATTGAGATGTACTGGGATGATATACCGAGGGATAGTTACCTTAAATTTGTTGAAGAATGTAAGGTTCTGTCTAAGTTACATCACAAGAACCTTGTTAGATTTCTGGGGTGGTGTAGGAGCAGAAAATTCAGGGCTATTATAACTGAATGGACAAGAGAAGAGAATGTTGAAATGTGGTTATCAGGGTCAGGTCCACCATGGAATCATAGACTGAAAGTGTTAATGGGAGTTGTTGCATGCATGCGTTATCTGCAGGAGGAATGGCCTGAAGTTGACTATGAACTCAACACAAGTAGTATTTTATTGTCTGACAATGTGGAACCATTGATTTCGAGGTTCAAAGTTGGAGATCAAAACAACAATCGAAGAAAGATACATAGGTTTGGAGTATTTCTTCTAGAGATGATACTAAGCAGAAAGGTTCAAGAGGAGTTTGATGGAGGTGATGCTGGATTTATTAGATTCATGAGAACCCTTAATCTTGCAGATTTGAAGCAGATGATTGATGAGAGAATGAAAGTAACTGAAACAATTTTTCATCAAGTTAAACAGGCATTGTCTCTAGGATTAATGTGCATAGACCAATCAAACAGTGACAAGCCTAGCTTGGCCATGATATTTAACACTATAGCAAGAGCCTACAAGGCTAGCCATGCTTTGCCATCTGCAAATCATAGATTTAAGAGACACATGCCTGTTCAAACCAAATAA 1584 0.3801 MVTISSTWYLFLPIILSLCPITLCASVLEDLKNLHQPPDFNSTIFSNCLKNPSLRYCSSSPMLDLDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPLSIMSIDLSNNSMKGDFPTDVLYCTQIQSLDLSINAFSGDIPIQSFSPLTNLTFLNLSYNCFSESKLSDSQFFKRFNSSSFLHSGALLDQKRFTVKAIFLLVGFPILVILMVICFLWLCFQRPDFLPSKLQRSRRFTPAILKAATNDFSNKYLVGKSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYLKFVEECKVLSKLHHKNLVRFLGWCRSRKFRAIITEWTREENVEMWLSGSGPPWNHRLKVLMGVVACMRYLQEEWPEVDYELNTSSILLSDNVEPLISRFKVGDQNNNRRKIHRFGVFLLEMILSRKVQEEFDGGDAGFIRFMRTLNLADLKQMIDERMKVTETIFHQVKQALSLGLMCIDQSNSDKPSLAMIFNTIARAYKASHALPSANHRFKRHMPVQTK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01258 527 Gene3D Ribonuclease Inhibitor 72 193 IPR032675 -
Gma05g01258 527 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 520 - -
Gma05g01258 527 Pfam Protein tyrosine and serine/threonine kinase 272 404 IPR001245 GO:0004672|GO:0006468
Gma05g01258 527 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 520 - -
Gma05g01258 527 SUPERFAMILY L domain-like 88 182 - -
Gma05g01258 527 ProSiteProfiles Protein kinase domain profile. 265 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma05g01258 527 SUPERFAMILY Protein kinase-like (PK-like) 243 502 IPR011009 -
Gma05g01258 527 Gene3D Phosphorylase Kinase; domain 1 240 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01258 Gma-Chr5 34257336 34259032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01258 122 501 Receptor kinase-like Gene Family AT5G45780 22.472 6.11e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma05g01258 PK_Tyr_Ser-Thr 2.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01258 - - gmx:100779045 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01258 05 34257336 34259032 Gma05g01258 05 34257336 34259032 ECH
Gma05g01258 05 34257336 34259032 Gma08g00752 08 6161957 6163641 GST