Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01252 ATGGACAACTATCAAGGTGATTTAAGTGACATAATTCGTGCTAGTGGTGCATCGTATGGCACTTGCAGCACGGGAACTCCATCATCTGAAGCTGCTAATCCCTTCTCTCGTGGTCACTTGCAATTCTCTTCTGATCCCATGATTTTCTCTTGTGTTTTGGAAGGGTTCAATAGCAACTTCGGTGATCCCTTCTCAAACATGAGAGATCCCTTTCTACACGAGCTTGATTTGCCTCCTTCTGCCTACTTTAACATCACAACAAGTTCATCTGCAGAAATGAGCAGTTCTGGGGCATTGGAAGAAGCAACTTGTTTTGGTGGTGGGGTTGTTGCTGGTAGTAGTAGTAGTAGTAATAGTTGTGTTTTGGCACAGAAGATTCTTGAGGATGATGATATGAGAAGGCCATGTAACAGCATATTGTCAAACATGATTCAGATCTCTCCCAATGATAAGTTACCCATCTCGCCAGCGGTGGATGCTTTGTCAAGGGCACTCAAGCCTTCTAGTATGGTAATTTCAGGTGACAACATGATTGATTCAAAGACCTCTATAGATCATTGCTTGGTGGACAACACAGAAGTGCAGATCTCATCTCCAAGGAATCCAGGTCTTAAGAGAAGAAAGAGCCAGGCAAAGAAGTCGATTTGTGTTCCTGCACCAACTGCACCAAATAGCAGACGAAGTGGCGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGATTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCAGCAAGGAAACAAGTTGAAAGGAGCAGAACAGACCCAAACATGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACACACAGAAATGCTCTCGCTGGTTCATCTCGATCCCAACCATCGAAAAACAACAACATTGCTGCTTCAAAGAATGAGGAAGAAGAGGAGGAGGAGAGCAACAGTGGCAGCAATAATGTAAATAACAGTGCATTTGTGAGGGAAGAAGAGAAGCAGCTTGAGATGGATGATGGAGAATTCAGTGATATTGGAATCCCTTATTGCAAGCCAATATCTAAGATGAAGAACAGCCAACAACTTGATCAGGGTTTGTTAGCAGAATTGGGAGAAATAGAATTTGCTGACTCAGTAAACCTATTGTCTCCACCACAAGGTTTTGATAATCAGAAAAGGGAATCCAACACTTTAGATTCATTCCATTTCTTTGACTGGAGAGGTGACAACAGCACCAAGTACCACCTTGTTTGA 1290 0.4326 MDNYQGDLSDIIRASGASYGTCSTGTPSSEAANPFSRGHLQFSSDPMIFSCVLEGFNSNFGDPFSNMRDPFLHELDLPPSAYFNITTSSSAEMSSSGALEEATCFGGGVVAGSSSSSNSCVLAQKILEDDDMRRPCNSILSNMIQISPNDKLPISPAVDALSRALKPSSMVISGDNMIDSKTSIDHCLVDNTEVQISSPRNPGLKRRKSQAKKSICVPAPTAPNSRRSGEVVPSDLWAWRKYGQKPIKDSPYPRGYYRCSSSKGCPARKQVERSRTDPNMLVITYTSEHNHPWPTHRNALAGSSRSQPSKNNNIAASKNEEEEEEESNSGSNNVNNSAFVREEEKQLEMDDGEFSDIGIPYCKPISKMKNSQQLDQGLLAELGEIEFADSVNLLSPPQGFDNQKRESNTLDSFHFFDWRGDNSTKYHLV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01252 429 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 5 421 - -
Gma05g01252 429 MobiDBLite consensus disorder prediction 196 230 - -
Gma05g01252 429 Pfam WRKY DNA -binding domain 235 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01252 429 MobiDBLite consensus disorder prediction 286 338 - -
Gma05g01252 429 ProSiteProfiles WRKY domain profile. 228 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma05g01252 429 MobiDBLite consensus disorder prediction 286 315 - -
Gma05g01252 429 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 421 IPR044810 GO:0003700
Gma05g01252 429 MobiDBLite consensus disorder prediction 258 277 - -
Gma05g01252 429 Gene3D WRKY domain 207 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01252 429 SUPERFAMILY WRKY DNA-binding domain 231 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma05g01252 429 SMART WRKY_cls 233 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01252 Gma-Chr5 34221731 34225806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01252 1 394 WRKY Transcription Factor Family AT2G34830 41.435 1.14e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma05g01252 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01252 - - gmx:100776919 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01252 05 34221731 34225806 Gma08g00746 08 6121479 6125078 GST