Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01231 ATGTTGTGGTGGAAGGCCCTGGGACAGTTTCCAATTATTCATGGTTCTTTTGATACTTTCTATTACCTTAAATTGAAGGGAATGAGTGTGGGGTCCAAAAGGATTGACTTTGTAGATGATTCAACCTCAAATGAAGTTAAGGGTAACATTATAATCGACTCAGGAACAACGTTGACCATTTTGCTAGAAAAATTTTACACTAAATTGGAGGCAGAAGTGGAAGCACATATCAATTTGGAACGTGTTAATAGCACTGACCAAATTCTAAGCCTTTGTTACAAGTCTCCACCAAATAATGCAATTGAGGTTCCAATTATTACAACACATTTTGCTGGCACAGACATTGTGTTAAATTCTTTAAACACTTTTGTTAGTGTTTCTGATGATGCAATGTGCTTTGCTTTCGCCCCAGTGGCATCAGGTTCCATCTTTGGAAACTTAGCACAGATGAACCAGTTGATCAAGAAAGCGAACCCAGAGGCCGAATTTAAGGAAATTTCAACCATGGTAGGTGCTAAATGGAAGACTATTACTGCAGAAGAAAAGAAGCCTTATGAGGGGATATACCATGCGGGGAAAGAAGCTTATTTGTAG 594 0.3872 MLWWKALGQFPIIHGSFDTFYYLKLKGMSVGSKRIDFVDDSTSNEVKGNIIIDSGTTLTILLEKFYTKLEAEVEAHINLERVNSTDQILSLCYKSPPNNAIEVPIITTHFAGTDIVLNSLNTFVSVSDDAMCFAFAPVASGSIFGNLAQMNQLIKKANPEAEFKEISTMVGAKWKTITAEEKKPYEGIYHAGKEAYL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01231 197 PANTHER OS07G0603500 PROTEIN-RELATED 11 155 - -
Gma05g01231 197 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 50 61 IPR001969 GO:0004190|GO:0006508
Gma05g01231 197 ProSiteProfiles Peptidase family A1 domain profile. 1 169 IPR033121 -
Gma05g01231 197 SUPERFAMILY Acid proteases 10 153 IPR021109 -
Gma05g01231 197 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 134 197 IPR009071 -
Gma05g01231 197 SUPERFAMILY HMG-box 152 196 IPR036910 -
Gma05g01231 197 Gene3D Acid Proteases 6 150 IPR021109 -
Gma05g01231 197 Pfam Xylanase inhibitor C-terminal 21 154 IPR032799 -
Gma05g01231 197 Gene3D High mobility group box domain 151 197 IPR036910 -
Gma05g01231 197 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 11 155 - -
Gma05g01231 197 CDD HMGB-UBF_HMG-box 154 196 - -
Gma05g01231 197 Pfam HMG (high mobility group) box 152 196 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01231 Gma-Chr5 33985775 33986523 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma05g01231 TAXi_C 2e-22 CL0129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01231 - - gmx:102663191 272.707