Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01230 ATGAATGACGTAAGGAAACTGGTGCAAGACTTAAAGCCTGTATTTCTGATGGTATCGGTGCAAATTGCATACTCTTCCGTGAATGTGCTCTATAAGCTCGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGCCTAATGTTCGCAGTAGTTTTCACTTCTTCTCTTGCTCTTATTTTCGAAAGAAAGAGCAGGCCAAAGCTGACATGGAGGGTGCTTTTCATGTCATTCTTTAGTGGCTTATTTGGTGCAAGTTTATTTCATAACCTATTCCTCGAGGCATTGGATTTGGTGTCAGCAACATTCGCTACTGCTGTTTATAATCTCGTTCCTGCAGTCACTTTTATATTGGCCATCTTGTGCGGCATGGAAAAGTTAAATGTGCGAACCGCAGCAGGGAAGGCCAAGGTGATGGGAACAATAATAGGAATTGGTGGGTCAATGTTGCTGACATTTTTCAAAGGGCAAGAGATTAACGTTAAGAGTTTCGGTACTAATCTTTTGCAAAAGAATGAGCAGGTAGTAGCTTTGCATACTGACTCTGGTAAAAAATTTCTGGGAGTTTTGTGTGGTTTTGGAAGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCCAAGATGAGTAAAGAATACCCAAGTCATCACTCAAGTACTGCATTGATGTCCTTGATGGCTGCAATACAAGCCACGGCCTTTGCCCTTTATGTTGAGAAGGATTGGAGCCAGTGGAAGTTGGGTTCGACTATTAGGATTCTAACTGTGGCTTATACGGCAATTGTGGCCTCCGGATTAGTGGTTATTGTCATTGCATGGTGTGTACGGATGAGAGGCCCAATGTTTGTATCTGTTTTCAACCCTCTTATGCTTGTGCTTGTGGCTGTGGCTGATTCCTTGATGTTTGGTGAAAATTTATATGTAGGAAGTGTAATGGGAGCCATGCTAATTGTGGGTGGCTTGTACATGGTTCTATGGGGTAAGAGCAAAGAAATGAAAAAGGCGAATCTGTCGGTCTCATCAGAAATCAACCAAGAGCATGAAGCAACTGAAGTTGTTGTCATGTCCACAACAATAAATGATGATAATTGTGACCGCGTTAACAATACCGACGCCAATTGTAAAAGCAATATAGTTGCCAAGGTTTCTTGA 1158 0.4214 MNDVRKLVQDLKPVFLMVSVQIAYSSVNVLYKLAINDGMSIRVVTAYRLMFAVVFTSSLALIFERKSRPKLTWRVLFMSFFSGLFGASLFHNLFLEALDLVSATFATAVYNLVPAVTFILAILCGMEKLNVRTAAGKAKVMGTIIGIGGSMLLTFFKGQEINVKSFGTNLLQKNEQVVALHTDSGKKFLGVLCGFGSCFSFALWLIIQSKMSKEYPSHHSSTALMSLMAAIQATAFALYVEKDWSQWKLGSTIRILTVAYTAIVASGLVVIVIAWCVRMRGPMFVSVFNPLMLVLVAVADSLMFGENLYVGSVMGAMLIVGGLYMVLWGKSKEMKKANLSVSSEINQEHEATEVVVMSTTINDDNCDRVNNTDANCKSNIVAKVS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01230 385 PANTHER WAT1-RELATED PROTEIN 12 360 - -
Gma05g01230 385 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Gma05g01230 385 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020|GO:0016021
Gma05g01230 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 332 - -
Gma05g01230 385 PANTHER WAT1-RELATED PROTEIN 12 360 IPR030184 GO:0016021|GO:0022857
Gma05g01230 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01230 Gma-Chr5 33971047 33975106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01230 11 364 Nodulin-like Gene Family AT1G25270 39.155 2.86e-87 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01230 - - gmx:100813812 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01230 05 33971047 33975106 Gma08g00727 08 5950234 5959321 GST
Gma05g01230 05 33971047 33975106 Gma15g00474 15 3989804 3991794 PCT