Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01215 ATGGTGAACGTTCCGAAGACAAAGAAGACCTACTGCAAGAGCAAGGAGTGCAGGAAGCACACGCTCCACAAGGTCACCCAATACAAGAAGGGCAAGGACAGCATCGCCGCTCAGGGAAAACGCCGTTATGACCGCAAACAGTCCGGTTACGGTGGCCAGACCAAGCCCGTTTTCCACAAAAAGGCGAAAACCACCAAGAAAATTGTGTTGAGGCTCCAGTGCCAAGGATGCAAGCATGTCTCGCAGCACGCTATCAAGAGGTGCAAGCACTTTGAGATCGGTGGTGACAAGAAGGGAAAAGGAACATCTCTCTTCTAG 318 0.5157 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01215 105 Pfam Ribosomal protein L44 19 94 IPR000552 GO:0003735|GO:0005840|GO:0006412
Gma05g01215 105 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 2 105 - -
Gma05g01215 105 ProSitePatterns Ribosomal protein L44e signature. 63 74 IPR000552 GO:0003735|GO:0005840|GO:0006412
Gma05g01215 105 MobiDBLite consensus disorder prediction 28 56 - -
Gma05g01215 105 SUPERFAMILY Zn-binding ribosomal proteins 2 94 IPR011332 GO:0006412
Gma05g01215 105 MobiDBLite consensus disorder prediction 28 48 - -
Gma05g01215 105 Gene3D - 1 105 - -
Gma05g01215 105 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 2 105 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01215 Gma-Chr5 33860139 33861326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01215 1 105 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 91.429 4.48e-67 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01215 K02929 - gmx:100795041 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01215 05 33860139 33861326 Gma08g00716 08 5892504 5893572 GST
Gma05g01215 05 33860139 33861326 Gma15g00488 15 4079956 4081079 PCT
Gma15g00488 15 4079956 4081079 Gma05g01215 05 33860139 33861326 PCT