Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01199 ATGGCAGCTGCAACATCTAGTGCTGTGTTAAATGGGTTTGGATCTCACTTCTTGTGTGGAGGAAAGAGGAGCCATGCCCTTCTTGCTGCTGGCATTGGAGGCAAAGTTGGTGCTGTTAAGTCATGGATCCCAGCTGTAAAAGGTGGTGGGAATTTCATTGACCCAGAATGGCTTGATGGCTCGCTACCAGGTGACTACGGTTTCGACCCATTAGGACTAGGAAAGGACCCAGCATTCCTCAAATGGTATAGAGAAGCTGAACTCATTCATGGGAGGTGGGCAATGGCTGCAGTTGTAGGCATCTTTATAGGGCAGGCTTGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGATCCTAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTCTGGGTACCCAGTTACTCCTAATGGGGTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGATTCTCAGTCAGTGGAGTGGGCCACTCCATGGTCAAGAACTGCTGAGAACTTTGGCAACTCTACTGGCGAACAAGGCTACCCTGGAGGAAAATTCTTTGACCCTTTGGGATTTGCTGGCACAATCAAGGATGGTGTTTACATTCCAGATACCGACAAGCTAGAGAGACTGAAATTGACTGAGATTAAGCACGCTAGGATTGCTATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGCCAGGGCAAGACACCCCTTGGTGCTCTTGGGTTGTAA 732 0.4891 MAAATSSAVLNGFGSHFLCGGKRSHALLAAGIGGKVGAVKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFGNSTGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLTEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01199 243 Gene3D Chlorophyll a/b binding protein domain 55 242 - -
Gma05g01199 243 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 243 IPR001344 GO:0009765|GO:0016020
Gma05g01199 243 Pfam Chlorophyll A-B binding protein 55 231 IPR022796 -
Gma05g01199 243 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 3 243 - -
Gma05g01199 243 SUPERFAMILY Chlorophyll a-b binding protein 51 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01199 Gma-Chr5 33673712 33674886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01199 1 243 Chloroplast and Mitochondria Gene Families AT1G15820 78.295 9.69e-145 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01199 K08917 - gmx:100783223 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01199 05 33673712 33674886 Gma08g00699 08 5769492 5770870 GST
Gma05g01199 05 33673712 33674886 Gma15g00504 15 4205304 4206410 PCT
Gma15g00504 15 4205304 4206410 Gma05g01199 05 33673712 33674886 PCT