Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01181 ATGGCGGAGCGTTCGTGTTTCGGATTGGGACCTCGATTAGATCTTCAGCAATTACAACTTGAAGCCCAGCATAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGCAATTATCAGATGTTTCAAATCACATCAGAACCACCTAACGGGCCACCAAGTGGTTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGCAAGCATGGAATTTTCTTATGTGGGAAGTGTTGACGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTTCACTACTTGGATGTTAAGGTTAACAAAACCAATGTTGGTGGAAAAACATATTCTGACGAGGTTACATCAGATTCCCAGAAGAGCAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTGCCTTCTGGAAGTACAGATTCCATGAGCCCAACAAGCACTTTGACATCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACACTCCTATCGTGAATCACAAAATCTGGGGAATGATCGTCCGATGGATAAGATTGATGCTCGTTCAAATAGTTCATATCCTATGCATCCGTTTTCAGGTGATCATGGGCAGTTACCAGTTTCTGGAGCAGAATATATCCCACATGTTCTGGGGGATAAGTCTAGAGCTAGTGATACTACTTACATTGAGGGTCAGAGAGCACAGGGCATTGCATCTTGGGACAATACCATGGAACAGTCTGCAGGAGAGTATGCTGATCCTTCTCTTGTATCATCTACAACCATTCCATCAAGTGCAGTGGGAAACATCCTTGAAGAAAACCATACTGTTCCTGGCAAACTTTTAGGGCGTAAAAATGCCCTAACTGAAGAGGAAAGGGGCTCTCAGCCTGTCCAATCAAATTGGCAGATTCCTTTTGAAGACAATACAGGAGAATTGCCTAATTGGGGCTTCACCCAATCATTGGGTTTGGAATTTGGATCTGATTATGGTGCTAGTTTACTGGGGGATGTAACTAATAATGCAGGCCCAGAAATTGTTCCTGAGCTGTTCACTTTTAATGGTGAGTTAAAAGAGCAGTCTGTGCACCAAAACTTCTCAAAGCTGTATACACATGGGCAATCTCAACCTACACTGAAATCCAATTCTGAATATGAAGTTCCTGGTGAAGCAAGTATCAATTATGCCTTGACCATGAGGCGTGGATTATTGGATGGAGAGGAGAGCCTCAAGAAGGTTGATAGTTTCTCTAGGTGGATGACTAAAGAATTTGCAGGTGTGGATGATCTGCATATGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAGTGTGGGGATGTGATAGATGATACCTCATTGAATCTGTCCCTGTCTCAAGACCAGCTGTTTAGCATAAATGATTTTTCTCCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTGTGGTGGCAAAATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGCTGATGGAATTCTGTGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATGTAACATGTTCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAGAGAGGGCTTTGATAGAAATATACAATTTGCAGATTGTTTTAACAATTCAACTGAAATGGTGCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAACTCAGTACGCACTTCAAATCAAGTGTTTGAGGGTGATATGGATAAAAGAAGCTTAATATTCAAGCTTATTTCACTGAAAGAGGAAGAGGAATATTCAAGTAAGGAAGAGACAACTGCAGAGATGGATATATCAAAACACAAGTTGAAGGAGCTTATGTTTCACAAGCAGGTTAAGGAGAAGTTGTACTCATGGCTTCTTCACAAAGTTACTGAAACTGGTAAAGGGCCTCTTGTATTAGATGAAGAAGGGCAAGGCGTGTTACACTTAATTGCTGCTCTTGGTTATGATTGGGCCATAAATCCAATCATAACTGCTGGAGTCAATATCAACTTCCGTGATGTGAATGGATGGACAGCTCTACACTGGGCTGCATTCTGTGGCCGAGAGCGAACAGTTGCTGTCCTTGTCTCCATGGGTGCAGCAGCTGGAGCATGGACAGATCCATGTCCAGAATTTCCTTCGGGTAGATCACCTGCAGATCTTGCTTCTAGCAAAGGCCATAAAGGAATCTCTGGTTTTCTTGCTGAGTCATTATTAACTGGCCACCTTGAATCACTCACAATGGATGAAAATAAAGATGGTAGGAAAGAAACTTCAGGAACGAAAGTAGTGCAAACAGCTTCAGAGCGAACTGCGACACCTGTGCTTTATGGTGATATACCAGATGCTATCTGCCTTAAGGATTCTCTTAATGCTGTCCGTAATGCTACACAAGCTGCTGATCGTATATATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTTGCTCAGTATGAAGATGATGAATTTGGATTGTCAGATCAACAAGCTCTTTCTCTCCTAGCTTCTAAGACGTGCAAATCTGGTCAAGGAGAGGGTTTAGCCAATGCTGCTGCAATACAAATACAGAAAAAGTTTCGTGGTTGGACGAAGAGAAAAGAATTCTTGATCATTCGCCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAACCAATCATTTGGTCCGTGGGAATCCTGGAAAAGGTCATATTACGCTGGAGACGCAAAGGCAGTGGCTTACGTGGATTTCGACCGGCTGCCCTGAACAAGGTCCCTGAACAACCAAGCGAATCTCCGAAAGAGGATGACTATGATTATCTCAAGGAAGGAAGGAAGCAGAGTGAAGTAAAGTTCAAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGGTAATTTGAATTTGATAAATTCGGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCATTCGATTGA 3288 0.4224 MAERSCFGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYQMFQITSEPPNGPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKASMEFSYVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNVGGKTYSDEVTSDSQKSSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLHSYRESQNLGNDRPMDKIDARSNSSYPMHPFSGDHGQLPVSGAEYIPHVLGDKSRASDTTYIEGQRAQGIASWDNTMEQSAGEYADPSLVSSTTIPSSAVGNILEENHTVPGKLLGRKNALTEEERGSQPVQSNWQIPFEDNTGELPNWGFTQSLGLEFGSDYGASLLGDVTNNAGPEIVPELFTFNGELKEQSVHQNFSKLYTHGQSQPTLKSNSEYEVPGEASINYALTMRRGLLDGEESLKKVDSFSRWMTKEFAGVDDLHMQSSPGISWSTDECGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPVVAKCNWSCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGFDRNIQFADCFNNSTEMVLHLRLVGLLSLNSVRTSNQVFEGDMDKRSLIFKLISLKEEEEYSSKEETTAEMDISKHKLKELMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLIAALGYDWAINPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMGAAAGAWTDPCPEFPSGRSPADLASSKGHKGISGFLAESLLTGHLESLTMDENKDGRKETSGTKVVQTASERTATPVLYGDIPDAICLKDSLNAVRNATQAADRIYQVFRMQSFQRKQFAQYEDDEFGLSDQQALSLLASKTCKSGQGEGLANAAAIQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKGSGLRGFRPAALNKVPEQPSESPKEDDYDYLKEGRKQSEVKFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINSEETVDGVEDLIDIDMLLDDENFLPIAFD 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01181 1095 MobiDBLite consensus disorder prediction 153 194 - -
Gma05g01181 1095 ProSiteProfiles CG-1 DNA-binding domain profile. 15 148 IPR005559 GO:0003677
Gma05g01181 1095 Gene3D - 919 965 - -
Gma05g01181 1095 ProSiteProfiles Ankyrin repeat profile. 744 776 IPR002110 GO:0005515
Gma05g01181 1095 Gene3D Immunoglobulins 504 599 IPR013783 -
Gma05g01181 1095 ProSiteProfiles Ankyrin repeat region circular profile. 744 769 - -
Gma05g01181 1095 SMART iq_5 918 940 IPR000048 GO:0005515
Gma05g01181 1095 SMART iq_5 941 963 IPR000048 GO:0005515
Gma05g01181 1095 Pfam IPT/TIG domain 511 596 IPR002909 -
Gma05g01181 1095 Pfam IQ calmodulin-binding motif 921 939 IPR000048 GO:0005515
Gma05g01181 1095 Pfam IQ calmodulin-binding motif 944 963 IPR000048 GO:0005515
Gma05g01181 1095 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1095 - -
Gma05g01181 1095 SUPERFAMILY E set domains 511 597 IPR014756 -
Gma05g01181 1095 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1095 - -
Gma05g01181 1095 SMART CG_1_2 18 143 IPR005559 GO:0003677
Gma05g01181 1095 SUPERFAMILY Ankyrin repeat 701 805 IPR036770 -
Gma05g01181 1095 Pfam CG-1 domain 21 141 IPR005559 GO:0003677
Gma05g01181 1095 ProSiteProfiles IQ motif profile. 942 966 IPR000048 GO:0005515
Gma05g01181 1095 MobiDBLite consensus disorder prediction 210 252 - -
Gma05g01181 1095 Gene3D - 674 811 IPR036770 -
Gma05g01181 1095 ProSiteProfiles IQ motif profile. 919 948 IPR000048 GO:0005515
Gma05g01181 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 920 969 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01181 Gma-Chr5 33470775 33481137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01181 1 1076 CAMTA Transcription Factor Family AT5G64220 52.583 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gma05g01181 CG-1 1.4e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01181 K21596 - gmx:100795682 2160.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01181 05 33470775 33481137 Gma08g00680 08 5628634 5639899 GST
Gma05g01181 05 33470775 33481137 Gma15g00515 15 4282205 4292905 PCT
Gma15g00515 15 4282205 4292905 Gma05g01181 05 33470775 33481137 PCT