Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01179 ATGAAGGTTGAAAATTTGGCCGACCTTGGAGTGGACCCCACACCCTCTCCCCACGGCCAGGGTGTCAGCAATAAAACAAAGGAGACTCAGAAACGGCAAAAGTCAATAAGGGCAACCTATGCCTTTTGGCCCCCATTCATTCATTCATTCCAAGTTTCCAACACAACACAAAGACTTTCTCAAACAAAACCAGACGATCTTTTTCCAGGGAAAAGTTTGGATGTTTTGTGCTCTGTCAGTCAGGTGGTCGGAGGGCGTTCTTCATGTAACTCTGGCAAAGGCAAGAGCAGTCAGTCCTTAGTCAAGTATGGCTATAGCCTAGTTAAAGGGAAAGCAAACCATCCGATGGAGGACTACCACGTAGCAAAATTTGTGCAGTTCAAAGGGCGAGAGCTTGGGCTTTTTGCTATATATGATGGACACCTGGGTGACAGTGTACCAGCCTATTTACAAAAGCATCTGTTTTCTAACATCTTGAAGGACGAGGACTTCTGGAATGATCCATTCATGTCCATTTCTAATGCGTATGAGACAACAGATCAGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCTGTTGTGTCGAGGGGAGGGGTGGCTGGACAGATGACAACTGATCATGAACCCAATACTGAGCGGGGAAGCATTGAGACCAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGTGCCTTCGGAGACAGAAACCTCAAAACACACTTACGATCTGATCCTGACATTCAGTATACTGACATTACCCCAGATGTTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAAGCTGTTGATATTGCAAGAAAGATAAAGGATCCACAAAAGGCAGCGAAACAACTAGCCACTGAGGCATTGAACAGAGACATGTGA 1017 0.4553 MKVENLADLGVDPTPSPHGQGVSNKTKETQKRQKSIRATYAFWPPFIHSFQVSNTTQRLSQTKPDDLFPGKSLDVLCSVSQVVGGRSSCNSGKGKSSQSLVKYGYSLVKGKANHPMEDYHVAKFVQFKGRELGLFAIYDGHLGDSVPAYLQKHLFSNILKDEDFWNDPFMSISNAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVVSRGGVAGQMTTDHEPNTERGSIETRGGFVSNMPGDVARVNGQLAVSRAFGDRNLKTHLRSDPDIQYTDITPDVELLILASDGLWKVMANQEAVDIARKIKDPQKAAKQLATEALNRDM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01179 338 Gene3D - 86 338 IPR036457 -
Gma05g01179 338 MobiDBLite consensus disorder prediction 1 30 - -
Gma05g01179 338 CDD PP2Cc 101 336 IPR001932 -
Gma05g01179 338 ProSiteProfiles PPM-type phosphatase domain profile. 102 338 IPR001932 -
Gma05g01179 338 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 76 337 - -
Gma05g01179 338 SMART PP2C_4 98 334 IPR001932 -
Gma05g01179 338 SUPERFAMILY PP2C-like 97 336 IPR036457 -
Gma05g01179 338 PANTHER PROTEIN PHOSPHATASE 2C 76 337 IPR015655 GO:0004722|GO:0006470
Gma05g01179 338 Pfam Protein phosphatase 2C 111 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01179 Gma-Chr5 33447005 33455510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01179 75 337 PP2C-type Phosphatase Gene Family AT1G22280 69.145 7.34e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01179 K17506 - gmx:100801722 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01179 05 33447005 33455510 Gma08g00678 08 5611077 5619652 GST
Gma05g01179 05 33447005 33455510 Gma15g00516 15 4297397 4302319 PCT
Gma15g00516 15 4297397 4302319 Gma05g01179 05 33447005 33455510 PCT