Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01176 ATGGTAATGACGTTGAAATCGAAAAGTGTTTCGATCCATTTTCCTTCTGAAGATGAATTTGGAAACCAATATCCTTTGGTTTTCAAGGTGACTAAATTCCTGTGTGGAGGTTTCATATTTGTAGTGGGCTGGTCTCACGCTGTTTGTGATGGAACTGGTGTATCTCAGTTCTTACGAGCCGTGGCAGAAATTGCAAGAGGAAAAACCGAGCCCTCTTTGAAACTTGTGAGGGAAAGAGAGAGACTAGTTGGCACGATCACTATTCAACCCATGAAAAATCCCATGGACAATGCCTCTCTTGCAGTTTCACCATTTCTGCTAAGCACAGATTTTTTGGATGAATACTATAAGGTGGACAGAGAGAGCATAGCAAGACTCAAGATGAGTTTGACGAAAGAAAGTGGCAATGAAGAAAGTACTGAGAAAAAAGGGTTAACAAATTTTGAAACCCTAGCTGCGTACATCTGGAGGTCAAGAACCAGAGCCTTAAAACTGAGCTACGATGGAGAAACTATGCTAGTTATCATAGTAGGGGTGAGACCACGCTTGCTGCAGGATTCTTTGCCCGGTGGATATTACGGGAATGCCATCACGCAAGCATTTGTTACGTTACACATGAATTATTTTGTTGCTCTTATAGATTAA 645 0.4155 MVMTLKSKSVSIHFPSEDEFGNQYPLVFKVTKFLCGGFIFVVGWSHAVCDGTGVSQFLRAVAEIARGKTEPSLKLVRERERLVGTITIQPMKNPMDNASLAVSPFLLSTDFLDEYYKVDRESIARLKMSLTKESGNEESTEKKGLTNFETLAAYIWRSRTRALKLSYDGETMLVIIVGVRPRLLQDSLPGGYYGNAITQAFVTLHMNYFVALID 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01176 214 Gene3D - 108 208 IPR023213 -
Gma05g01176 214 Gene3D - 4 92 IPR023213 -
Gma05g01176 214 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 207 - -
Gma05g01176 214 PANTHER ACYL TRANSFERASE 4 7 207 - -
Gma05g01176 214 Pfam Transferase family 22 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01176 Gma-Chr5 33420455 33421099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01176 26 200 Monolignol Biosynthesis Gene Families AT5G48930 29.016 2.61e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01176 K20240 - gmx:100783730 278.485