Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01171 ATGGTGGGTGCTTCATCAACGACAACAACCTGTGGCGGAGGACAGGGTTCTCGTCGCTCTTGGAGTTCACATTGGGCAGAGCAACTTCTCTGCATTGCGCTGGGATGCAAAACCCTTGCTGCAATCACCACCACGGCACAGCCGCACACCTCAGAGACGCCACCGCAACCAGGTCAATGCAATTTCGAGAAGAAACAGAAGAACATTGCTACGCCCATAGTAGCATCAATTAGTGGGGTGTTGATTCTTCTAGTAGCCGTGGCAATATTGTGGACCCTTAAAAGGAGAAAATCAAAAGAAAAATCAACAGCTTTAATGGAAGTGAATGATGAAAGTAAAATCTCACGCCTGCAATCCAAAGAAGAAGATGATTCATTACTGCAAGTCAAAAAACAAATATATTCATACTCTGACGTCCTTAAAATCACCAACAATTTCAATACAATTATTGGTAAAGGAGGATTTGGAACAATTTACCTGGGCTATATGGATGACAGTCCAGTTGCAGTGAAAGTGCTTTCTCCATCGATTGTACATGGCTTTCAACAATTTCAAGCAGAGGTTAAACTTCTAATCAGAGTTCATCACAAAAACTTAACATCCCTTATTGGTTATTGCAATGAAGGAACCAATAAGGCTTTCATATATGAGTATATAGCTAATGGGAACTTACAAGAACATCTCTCTGGTAAACACAGCAAATCAACGTTCTTGAGCTGGGAGGACAGACTTCATATAGCAGTGGATACAGCCTTAGGTCAGAAACTAAACTTCAAATTATTTTGA 786 0.4109 MVGASSTTTTCGGGQGSRRSWSSHWAEQLLCIALGCKTLAAITTTAQPHTSETPPQPGQCNFEKKQKNIATPIVASISGVLILLVAVAILWTLKRRKSKEKSTALMEVNDESKISRLQSKEEDDSLLQVKKQIYSYSDVLKITNNFNTIIGKGGFGTIYLGYMDDSPVAVKVLSPSIVHGFQQFQAEVKLLIRVHHKNLTSLIGYCNEGTNKAFIYEYIANGNLQEHLSGKHSKSTFLSWEDRLHIAVDTALGQKLNFKLF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01171 261 ProSitePatterns Protein kinases ATP-binding region signature. 150 171 IPR017441 GO:0005524
Gma05g01171 261 MobiDBLite consensus disorder prediction 1 20 - -
Gma05g01171 261 PANTHER OS07G0107800 PROTEIN-RELATED 59 253 - -
Gma05g01171 261 PANTHER PUTATIVE-RELATED 59 253 - -
Gma05g01171 261 Pfam Protein tyrosine and serine/threonine kinase 146 253 IPR001245 GO:0004672|GO:0006468
Gma05g01171 261 SUPERFAMILY Protein kinase-like (PK-like) 126 253 IPR011009 -
Gma05g01171 261 Gene3D Transferase(Phosphotransferase) domain 1 125 255 - -
Gma05g01171 261 ProSiteProfiles Protein kinase domain profile. 144 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01171 Gma-Chr5 33313696 33315101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01171 59 253 Receptor kinase-like Gene Family AT2G19210 45.408 9.36e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma05g01171 PK_Tyr_Ser-Thr 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01171 - - gmx:100170722 343.969