Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01165 ATGGGATCAGTGACGGACCCAGAAAAGATTGGTTCAAATTTCAAAGATTCTGATTCTGATGAACCGGCTGATTCTTTTGCACCCCCAGCAAAGAAACCCCGTGTTATGTGGTCAAAAGAATTGCATCAGCATTTTGTCAACGCTTTTATGCAAATTGGACTTGACAAGGCAAAGCCAAAGAGGATTGTTGAAGCTATGAATATCCCTGGTTTGACAAGAGAGCAAGTAGCTAGTCATTTGCAGGTGCCAAGCTTGTTTTCTATCCAAACTCAGGCACTTGCATTTTGTGATTCTAAACAGTAA 303 0.4125 MGSVTDPEKIGSNFKDSDSDEPADSFAPPAKKPRVMWSKELHQHFVNAFMQIGLDKAKPKRIVEAMNIPGLTREQVASHLQVPSLFSIQTQALAFCDSKQ 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01165 100 Pfam Myb-like DNA-binding domain 35 81 IPR001005 -
Gma05g01165 100 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 80 IPR045279 GO:0009736
Gma05g01165 100 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 82 IPR006447 GO:0003677
Gma05g01165 100 Gene3D - 29 86 - -
Gma05g01165 100 MobiDBLite consensus disorder prediction 1 31 - -
Gma05g01165 100 SUPERFAMILY Homeodomain-like 30 82 IPR009057 -
Gma05g01165 100 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 17 80 - -
Gma05g01165 100 MobiDBLite consensus disorder prediction 11 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01165 Gma-Chr5 33146760 33148359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01165 18 86 Response Regulator Gene Family AT3G16857 57.971 1.34e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma05g01165 Myb_DNA-binding 6.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01165 - K14491 gmx:102661810 106.686