Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01164 ATGGGCACGTACCCCACTGAGAAGGTTTTCTTTCAATTCCCAGCAGGTCTTAGGGTCCTTGCAGTTGATCATGACACCACTATTCTTGATGTCATTAAGAAAATGTGTTTTCGATGCCACTACCGCGCTGTCACATACTCCGATGCCTCACTTGCTTTGAATTATGTTCGGGAGAAGAAAGATTGCATTGATGTGATACTCATTGAAGTTCACATGCCATATGGGGATAGCTATGAATTCCTTCAGCATGTGACTGTGGAAACTAATATTCCAGTTATCATGATGTCTCTCGATGATGCTAAGAGTACTGTGATGAAGGCTATTATAGATGGAGCTTGTGATTATAGGATTAAGCCTTTGCATGAGAACCAATTCAAGATTATGTGGAAGCATGTTGCTAGGAAACTCTGGAGTAAAAATCAGCTACCAAAAAAAGAAGATTCTGAATATGTTGCTTCTTATGTTCTTGATTCAACAGTTATGGACCCAGAAAAGATTGGTTCAAATTTCAAAGATTCTGACTCTTATGAACCGGGTGATTCTTTTGCACCCCCAGCAAAGAAACCACGTGTTAGGTGTATGATTAATTCTTCACCATTTGTTTTCCTCTTAGTTGAAGCAAAGCCAAAGAGGATTGTTGAAGCTATGAATATCCCTGCTTTGATAAGAGAGCAAGTAGCTAGTCATTTGCAG 693 0.3968 MGTYPTEKVFFQFPAGLRVLAVDHDTTILDVIKKMCFRCHYRAVTYSDASLALNYVREKKDCIDVILIEVHMPYGDSYEFLQHVTVETNIPVIMMSLDDAKSTVMKAIIDGACDYRIKPLHENQFKIMWKHVARKLWSKNQLPKKEDSEYVASYVLDSTVMDPEKIGSNFKDSDSYEPGDSFAPPAKKPRVRCMINSSPFVFLLVEAKPKRIVEAMNIPALIREQVASHLQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01164 231 CDD REC_typeB_ARR-like 19 133 - -
Gma05g01164 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 8 229 - -
Gma05g01164 231 SMART REC_2 17 129 IPR001789 GO:0000160
Gma05g01164 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 229 IPR045279 GO:0009736
Gma05g01164 231 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Gma05g01164 231 Pfam Response regulator receiver domain 19 125 IPR001789 GO:0000160
Gma05g01164 231 SUPERFAMILY CheY-like 16 143 IPR011006 -
Gma05g01164 231 Gene3D - 17 150 - -
Gma05g01164 231 Gene3D - 164 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01164 Gma-Chr5 33144154 33145157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01164 12 231 Response Regulator Gene Family AT2G25180 33.906 1.07e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma05g01164 Response_reg 2.1e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01164 - K14491 gmx:102662429 396.741