Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01153 ATGTTTACGAAAAAAAGGGATGTTACAGCGGCCAACGTGAGACTCTCCCTTCCCCATGACGTGGATGTTGGTGTGTTGAAGAAAGTGGTTCAATGGATAATGCTGATGATAAGCAGAAGCAGAGCAGGTTACAAGGAAAGGGATGTTGGAATGGTTTCGTGTGGAGAACTAAGATACCCATCTTGTTCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGGATGATGACTTTAAGCTAATTGGCAGAATGTCGCCAGCACAAGGAGGATATGGCACATACATGCTTATATTTCAGCAGCCACTAGATATGCAACACTTGGTGCTCCTACTTTGTATGACCATCCTGGCCCAATTTATGGAAGTAGTGGTAGAAAGTTTTTTGGCAAGAAACCAGCATGAGCAGAAGTCAAGAAAACAAAAACATGAGGTTATATCAAGTTCTCTGTTTGCAAGACTTGAAAAGGTCATTCACTTCAATTATTTTTGGACTAGGTGCACAAAGCTCATTATTGTGAACTTGTTTTCGGTGCATTGTGTGGGATGCTTTAACTATCTCATTGCTGATAGGTATCTAGATTCCAAAAGAACATGGATTGGTGCAGTGTACCCAAATTTCAAAGAAGAAAGTCTTTGGGACAAATATGTCACTGCAATATATTGGTCCATTGTCACTGTTACTACCACTGGCTATGGGGATTTACACAAGAGAGATGTTGTTTAA 732 0.4057 MFTKKRDVTAANVRLSLPHDVDVGVLKKVVQWIMLMISRSRAGYKERDVGMVSCGELRYPSCSVKHGWRYPGIGEFQDDDFKLIGRMSPAQGGYGTYMLIFQQPLDMQHLVLLLCMTILAQFMEVVVESFLARNQHEQKSRKQKHEVISSSLFARLEKVIHFNYFWTRCTKLIIVNLFSVHCVGCFNYLIADRYLDSKRTWIGAVYPNFKEESLWDKYVTAIYWSIVTVTTTGYGDLHKRDVV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01153 243 PANTHER POTASSIUM CHANNEL AKT1 150 240 IPR045319 GO:0005249|GO:0006813
Gma05g01153 243 SUPERFAMILY Voltage-gated potassium channels 152 238 - -
Gma05g01153 243 Pfam Glycosyl hydrolase family 14 47 78 IPR001554 GO:0000272|GO:0016161
Gma05g01153 243 Gene3D Glycosidases 40 96 - -
Gma05g01153 243 PANTHER POTASSIUM CHANNEL KAT1 150 240 - -
Gma05g01153 243 Gene3D - 141 242 - -
Gma05g01153 243 SUPERFAMILY (Trans)glycosidases 49 81 IPR017853 -
Gma05g01153 243 Pfam Ion transport protein 152 239 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01153 Gma-Chr5 32743228 32746059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01153 150 241 Ion Channels AT5G46240 75.000 5.73e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01153 K21867 - gmx:100784043 410.609