Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g01145 ATGGGAAGTGGAGTTTCAACACTCTGTTGGTGCTCTGGGACCAACAACGAGCCCGACGTTATTTTCAGCGCCACCGACCCACTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCACGCTTCCTCTCTCCCACTCACTCCGATCGCTTCCTCAGTCCTTCTACTTCCCTTCGTTTCTCTCCGACCCATACCCGACCCGAATTTCACGAAACCGGGTTCAAAGCCATTTCCGGAGCCTCCGTCAGCGCCAACAGCTCCCTTCCGACAACAGTCATTCACTTGGACGAAGAGGTGAACGGAGTTTCCTCCAGGGGTAATATCGTAAATGGCTTCGAAAGCACGGCGTCGTTTTCCGCCCTCCCGCTCCAGCCCGTTCCCCGAGGCGGCGAGCCCTTCGAGGTCAGCGGCTTCTTCCTCTCCGGTCCAATTGAAGCCAACGCCGTCTCCGGCCCTCTCCCTTCCGCCGCCGCCTACGGAGTCGGCGGCGGCGATGTTCCTTTCTCGGCGCCGCTGGCCGGACTTTACAGTAAGAAGAACAAGAAGAAGGTGATTTCGGGGTTCCGGAAGACCTTCAACCGGAACACGCCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTTGCCGGAAGAAAAGAAAGCGAGGGAAGGCCGCAGCAGCCGCCGCAGGCGGCGGCGGCGGCGAGCAATGTGCAGTGGGCGTTGGGGAAGGCTGGTGAGGATCGCGTCCACGTGGTGGTGTCGGAGGAGCTTGGATGGTTGTTCGTCGGGATTTACGACGGTTTCAACGGCGGCGACGCGCCGGAGTTTCTGATGGGGAACCTCTACCGCGCCGTTCATAACGAGCTTCAGGGTTTGTTCTGGGAACTTGAAGAAGAAGAACAACCGTTACCGCAAGAGAGCAATCCAGTGGTGGAAGGAACGGAGAGTAAACGGCGTAAGCTGTGGGAGCTTCTTGCCGAGGATGGACTCGACCTTTCGGGTTCGGATAGGTTCGCGTTTTCCGTGGACGATGCGTTGAGCGTTAACAACGCCAATGCTGGGTCTGCTGTGAGTAGAAGGTGGTTGTTGCTGTCGAAGCTGAAGCAGGGGTTGACGAAGCAGAAGGAGGGTGAAGGGAGAGGGTGGAATATGGGGAATGAGGAGAAGGAGAGGGAGAATCAAGAGAAGCATTGTGGGAGGAAGAGGAGAGTGGGACCGGTGGATCATGGACTGGTTTTGAGTGCCTTGTCTCGGGCGCTTGAAGTCACCGAGCTTGCTTATTTGGATATGACGGATAAGCTGCTGGACACGAATCCGGAGCTTGCTTTGATGGGTTCGTGTTTGTTGGTTGCATTGATGAGGGATGAGGATGTGTATGTCATGAATGTTGGGGATAGTCGGGCTATTGTTGCTCACTATGAACCGAAAGAGGTTGATTCTAGTGTTGAATTGGGAAGCAAGAGAGGTGTTGAGTCCGGTGCCCAGAGCATAGTTGAGGTCCCCCTGGGTTTGGGTCAAATTGGGAGTGCTCAACAAAAGAGGTTGGTGGCATTGCAGCTGTCCACTGATCACAGCACCAGCATTGAAGAAGAAGTCATTAGGATTAAAAACGAGCATCCTGATGATGCCCAATGTATAGTCAATGGCAGAGTTAAAGGTCGCCTTAAGGTCACCAGAGCATTTGGGGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGCCGTACTAGAGATGTTTCGTAATGAATTTATTGGCACTGCTCCATATATATCCTGCTCTCCTTCACTATGTCACCATAGATTATGCCAGAGAGACCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATCTAAACAATGATGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCGGAAGGAGATCCAGCCCAACATTTAATAGAAGAACTGCTGCTCCGTGCAGCTAAGAAGGCTGGAATGGATTTTCATGAATTGCTGGATATCCCACAAGGAGATCGGAGGAAGTATCACGATGACGTTACTGTCATGGTGATATCACTTGAAGGGAGAATCTGGAAATCATCAGGGAAGTATCCATGA 2091 0.5285 MGSGVSTLCWCSGTNNEPDVIFSATDPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRFSPTHTRPEFHETGFKAISGASVSANSSLPTTVIHLDEEVNGVSSRGNIVNGFESTASFSALPLQPVPRGGEPFEVSGFFLSGPIEANAVSGPLPSAAAYGVGGGDVPFSAPLAGLYSKKNKKKVISGFRKTFNRNTPEKKRPWVVPVLNFAGRKESEGRPQQPPQAAAAASNVQWALGKAGEDRVHVVVSEELGWLFVGIYDGFNGGDAPEFLMGNLYRAVHNELQGLFWELEEEEQPLPQESNPVVEGTESKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKQGLTKQKEGEGRGWNMGNEEKERENQEKHCGRKRRVGPVDHGLVLSALSRALEVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYEPKEVDSSVELGSKRGVESGAQSIVEVPLGLGQIGSAQQKRLVALQLSTDHSTSIEEEVIRIKNEHPDDAQCIVNGRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEFIGTAPYISCSPSLCHHRLCQRDQFLILSSDGLYQYLNNDEVVSHVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g01145 696 MobiDBLite consensus disorder prediction 374 400 - -
Gma05g01145 696 Pfam Protein phosphatase 2C 517 652 IPR001932 -
Gma05g01145 696 SMART PP2C_4 227 682 IPR001932 -
Gma05g01145 696 SUPERFAMILY PP2C-like 230 685 IPR036457 -
Gma05g01145 696 Gene3D - 216 691 IPR036457 -
Gma05g01145 696 PANTHER PROTEIN PHOSPHATASE 2C 15 303 IPR015655 GO:0004722|GO:0006470
Gma05g01145 696 PANTHER PROTEIN PHOSPHATASE 2C 372 694 IPR015655 GO:0004722|GO:0006470
Gma05g01145 696 PANTHER PROTEIN PHOSPHATASE 2C 29 15 303 - -
Gma05g01145 696 PANTHER PROTEIN PHOSPHATASE 2C 29 372 694 - -
Gma05g01145 696 CDD PP2Cc 407 684 IPR001932 -
Gma05g01145 696 ProSiteProfiles PPM-type phosphatase domain profile. 229 684 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g01145 Gma-Chr5 32537217 32542622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g01145 1 695 PP2C-type Phosphatase Gene Family AT2G35350 55.220 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g01145 - - gmx:100781535 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01145 05 32537217 32542622 Gma05g01145 05 32537217 32542622 ECH
Gma17g01404 17 13137534 13141636 Gma05g01145 05 32537217 32542622 GST
Gma01g02024 01 55656041 55661161 Gma05g01145 05 32537217 32542622 PCT
Gma11g00386 11 3144553 3149351 Gma05g01145 05 32537217 32542622 PCT
Gma05g01145 05 32537217 32542622 Gma01g02024 01 55656041 55661161 PCT
Gma05g01145 05 32537217 32542622 Gma11g00386 11 3144553 3149351 PCT